Add a description of 'make upload-distfiles' to the TeXlive package section.

TeXlive packages are unusual in avoiding direct downloads from the upstream
CTAN repository.  Therefore, developers must manually upload the appropriate
distfiles.  To help avoid forgetting this step, add a description to the
Pkgsrc Guide in the section describing TeXlive packages.

(brook)

R-ggtern: fix an incorrect dependency.

The missing dependency added in the previous commit was wrong, so fix it.

(brook)

Add the biopython license to DEFAULT_ACCEPTABLE_LICENSES.

The biopython license is _very_ similar, but not identical, to many
other open source licenses used throughout pkgsrc.  The gratuitous
differences are being addressed by the project through an effort to
relicense all files to the 3-clause BSD license.  In the meantime,
Debian has accepted that the current biopython license meets the DFSG
and includes the package in their main distribution.  Consequently,
rename the license file and add it to DEFAULT_ACCEPTABLE_LICENSES.

See http://mail-index.netbsd.org/pkgsrc-changes/2019/08/13/msg195804.html.

(brook)

doc/pkgsrc.*: regen

(brook)

Add a section to "Common packages" describing a typical TeXlive package.

(brook)

Add a section to "Common packages" describing a typical R package.

(brook)

py-biopython: initial commit of the biopython license

The Biopython package contains high-quality, reusable modules and
scripts written in Python to make it as easy as possible to use Python
for bioinformatics.  The Biopython includes the follwing: the ability
to parse bioinformatics files into python utilizable data structures,
including support for the formats such as Blast output, Clustalw,
FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP,
Rebase, UniGene, and SwissProt.

(brook)

graphviz: add a missing -I flag when compiling perl files.

See https://gitlab.com/graphviz/graphviz/issues/1576.

(brook)

xca: initial commit

X - Certificate and Key management

This application is intended for creating and managing X.509
certificates, certificate requests, RSA, DSA and EC private keys,
Smartcards and CRLs.  Everything that is needed for a CA is
implemented.  All CAs can sign sub-CAs recursively. These certificate
chains are shown clearly.  For an easy company-wide use there are
customiseable templates that can be used for certificate or request
generation.

All cryptographic data is stored in a SQL database. SQLite, MySQL
(MariaDB) and PostgreSQL databases are supported.

(brook)

tex-outline-doc: initial commit

Documentation for tex-outline.

(brook)

tex-outline: initial commit

The package defines an outline environment, which provides
facilities similar to enumerate, but up to 6 levels deep.

(brook)

tex-nfssext-cfr-doc: initial commit

Documentation for tex-nfssext-cfr.

(brook)

tex-nfssext-cfr: initial commit

The package is a development of nfssext.sty, distributed with
the examples for the font installation guide. The package has
been developed for use in packages such as cfr-lm and
venturisadf.

(brook)

tex-beamerposter-doc: initial commit

Documentation for tex-beamerposter.

(brook)

tex-beamerposter: initial commit

The package enables the user to use beamer style operations on
a canvas of the sizes provided by a0poster; font scaling is
available (using packages such as type1cm if necessary). In
addition, the package allows the user to benefit from the nice
colour box handling and alignment provided by the beamer class
(for example, with rounded corners and shadows). Good looking
posters may be created very rapidly. Features include: scalable
fonts using the fp and type1cm packages; posters in A-series
sizes, and custom sizes like double A0 are possible; still
applicable to custom beamer slides, e.g. 16:9 slides for a
wide-screen (i.e. 1.78 aspect ratio); orientation may be
portrait or landscape; a 'debug mode' is provided.

(brook)

tex-chemfig-doc: initial commit

Documentation for tex-chemfig.

(brook)

tex-chemfig: initial commit

The package provides the command \chemfig{<code>}, which draws
molecules using the TikZ package. The <code> argument provides
instructions for the drawing operation. While the diagrams
produced are essentially 2-dimensional, the package supports
many of the conventional notations for illustrating the
3-dimensional layout of a molecule. The package uses TikZ for
its actual drawing operations.

(brook)

Revert the previous commit.

(brook)

doc/pkgsrc.*: regen

(brook)

R-ggtern: add a missing dependency.

(brook)

py-biopython: initial commit

The Biopython package contains high-quality, reusable modules and
scripts written in Python to make it as easy as possible to use Python
for bioinformatics.  The Biopython includes the follwing: the ability
to parse bioinformatics files into python utilizable data structures,
including support for the formats such as Blast output, Clustalw,
FASTA, GenBank, PubMed and Medicine, various Expasy files, SCOP,
Rebase, UniGene, and SwissProt.

(brook)

R-ggExtra: initial commit

Collection of functions and layers to enhance 'ggplot2'. The flagship
function is 'ggMarginal()', which can be used to add marginal
histograms/boxplots/density plots to 'ggplot2' scatterplots.

(brook)

R-colourpicker: initial commit

A colour picker that can be used as an input in Shiny apps or
Rmarkdown documents. The colour picker supports alpha opacity, custom
colour palettes, and many more options. A Plot Colour Helper tool is
available as an RStudio Addin, which helps you pick colours to use in
your plots. A more generic Colour Picker RStudio Addin is also
provided to let you select colours to use in your R code.

(brook)

R-miniUI: initial commit

Provides UI widget and layout functions for writing Shiny apps that
work well on small screens.

(brook)

R-shinyjs: initial commit

Perform common useful JavaScript operations in Shiny apps that will
greatly improve your apps without having to know any JavaScript.
Examples include: hiding an element, disabling an input, resetting an
input back to its original value, delaying code execution by a few
seconds, and many more useful functions for both the end user and the
developer. 'shinyjs' can also be used to easily call your own custom
JavaScript functions from R.

(brook)

R-shiny: initial commit

Makes it incredibly easy to build interactive web applications with R.
Automatic "reactive" binding between inputs and outputs and extensive
prebuilt widgets make it possible to build beautiful, responsive, and
powerful applications with minimal effort.

(brook)

R-httpuv: initial commit

Provides low-level socket and protocol support for handling HTTP and
WebSocket requests directly from within R. It is primarily intended as
a building block for other packages, rather than making it
particularly easy to create complete web applications using httpuv
alone. httpuv is built on top of the libuv and http-parser C
libraries, both of which were developed by Joyent, Inc. (See LICENSE
file for libuv and http-parser license information.)

(brook)

R-promises: initial commit

Provides fundamental abstractions for doing asynchronous programming
in R using promises. Asynchronous programming is useful for allowing a
single R process to orchestrate multiple tasks in the background while
also attending to something else. Semantics are similar to
'JavaScript' promises, but with a syntax that is idiomatic R.

(brook)

R-later: initial commit

Executes arbitrary R or C functions some time after the current time,
after the R execution stack has emptied.

(brook)

R-devtools: initial commit

Collection of package development tools.

(brook)

R-roxygen2: initial commit

Generate your Rd documentation, 'NAMESPACE' file, and collation field
using specially formatted comments. Writing documentation in-line with
code makes it easier to keep your documentation up-to-date as your
requirements change. 'Roxygen2' is inspired by the 'Doxygen' system
for C++.

(brook)

R-pkgload: initial commit

Simulates the process of installing a package and then attaching it.
This is a key part of the 'devtools' package as it allows you to
rapidly iterate while developing a package.

(brook)

R-rcmdcheck: initial commit

Run 'R CMD check' from 'R' and capture the results of the individual
checks. Supports running checks in the background, timeouts, pretty
printing and comparing check results.

(brook)

R-usethis: initial commit

Automate package and project setup tasks that are otherwise performed
manually. This includes setting up unit testing, test coverage,
continuous integration, Git, 'GitHub', licenses, 'Rcpp', 'RStudio'
projects, and more.

(brook)

R-gh: initial commit

Minimal client to access the 'GitHub' 'API'.

(brook)

R-httr: initial commit

Useful tools for working with HTTP organised by HTTP verbs (GET(),
POST(), etc). Configuration functions make it easy to control
additional request components (authenticate(), add_headers() and so
on).

(brook)

R-pkgbuild: initial commit

Provides functions used to build R packages. Locates compilers needed
to build R packages on various platforms and ensures the PATH is
configured appropriately so R can use them.

(brook)

R-callr: initial commit

It is sometimes useful to perform a computation in a separate R
process, without affecting the current R process at all. This packages
does exactly that.

(brook)

R-openssl: initial commit

Bindings to OpenSSL libssl and libcrypto, plus custom SSH key parsers.
Supports RSA, DSA and EC curves P-256, P-384, P-521, and curve25519.
Cryptographic signatures can either be created and verified manually
or via x509 certificates. AES can be used in cbc, ctr or gcm mode for
symmetric encryption; RSA for asymmetric (public key) encryption or EC
for Diffie Hellman. High-level envelope functions combine RSA and AES
for encrypting arbitrary sized data. Other utilities include key
generators, hash functions (md5, sha1, sha256, etc), base64 encoder, a
secure random number generator, and 'bignum' math methods for manually
performing crypto calculations on large multibyte integers.

(brook)

R-xopen: initial commit

Cross platform solution to open files, directories or 'URLs' with
their associated programs.

(brook)

R-processx: initial commit

Tools to run system processes in the background. It can check if a
background process is running; wait on a background process to finish;
get the exit status of finished processes; kill background processes.
It can read the standard output and error of the processes, using
non-blocking connections. 'processx' can poll a process for standard
output or error, with a timeout. It can also poll several processes at
once.

(brook)

R-askpass: initial commit

Cross-platform utilities for prompting the user for credentials or a
passphrase, for example to authenticate with a server or read a
protected key. Includes native programs for MacOS and Windows, hence
no 'tcltk' is required. Password entry can be invoked in two different
ways: directly from R via the askpass() function, or indirectly as
password-entry back-end for 'ssh-agent' or 'git-credential' via the
SSH_ASKPASS and GIT_ASKPASS environment variables. Thereby the user
can be prompted for credentials or a passphrase if needed when R calls
out to git or ssh.

(brook)

R-desc: initial commit

Tools to read, write, create, and manipulate DESCRIPTION files. It is
intended for packages that create or manipulate other packages.

(brook)

R-testthat: initial commit

Software testing is important, but, in part because it is frustrating
and boring, many of us avoid it. 'testthat' is a testing framework for
R that is easy to learn and use, and integrates with your existing
'workflow'.

(brook)

R-ps: initial commit

List, query and manipulate all system processes, on 'Windows', 'Linux'
and 'macOS'.

(brook)

R-git2r: initial commit

Interface to the 'libgit2' library, which is a pure C implementation
of the 'Git' core methods. Provides access to 'Git' repositories to
extract data and running some basic 'Git' commands.

(brook)

R-sys: initial commit

Drop-in replacements for the base system2() function with fine control
and consistent behavior across platforms. Supports clean interruption,
timeout, background tasks, and streaming STDIN / STDOUT / STDERR over
binary or text connections. Arguments on Windows automatically get
encoded and quoted to work on different locales.

(brook)

R-rprojroot: initial commit

Robust, reliable and flexible paths to files below a project root. The
'root' of a project is defined as a directory that matches a certain
criterion, e.g., it contains a certain regular file.

(brook)

R-sessioninfo: initial commit

Query and print information about the current R session. It is similar
to 'utils::sessionInfo()', but includes more information about
packages, and where they were installed from.

(brook)

R-remotes: initial commit

Download and install R packages stored in 'GitHub', 'BitBucket', or
plain 'subversion' or 'git' repositories. This package provides the
'install_*' functions in 'devtools'. Indeed most of the code was
copied over from 'devtools'.

(brook)

R-brew: initial commit

brew implements a templating framework for mixing text and R code for
report generation. brew template syntax is similar to PHP, Ruby's erb
module, Java Server Pages, and Python's psp module.

(brook)

R-commonmark: initial commit

The CommonMark specification defines a rationalized version of
markdown syntax. This package uses the 'cmark' reference
implementation for converting markdown text into various formats
including html, latex and groff man. In addition it exposes the
markdown parse tree in xml format. Also includes opt-in support for
GFM extensions including tables, autolinks, and strikethrough text.

(brook)

R-xml2: initial commit

Work with XML files using a simple, consistent interface. Built on top
of the 'libxml2' C library.

(brook)

R-praise: initial commit

Build friendly R packages that praise their users if they have done
something good, or they just need it to feel better.

(brook)

R-clisymbols: initial commit

A small subset of Unicode symbols, that are useful when building
command line applications. They fall back to alternatives on terminals
that do not support Unicode. Many symbols were taken from the
'figures' 'npm' package (see
<https://github.com/sindresorhus/figures>).

(brook)

R-fs: initial commit

A cross-platform interface to file system operations, built on top of
the 'libuv' C library.

(brook)

R-ini: initial commit

Parse simple '.ini' configuration files to an structured list. Users
can manipulate this resulting list with lapply() functions. This same
structured list can be used to write back to file after modifications.

(brook)

R-whisker: initial commit

logicless templating, reuse templates in many programming languages
including R

(brook)

R-tidyr: initial commit

An evolution of 'reshape2'. It's designed specifically for data
tidying (not general reshaping or aggregating) and works well with
'dplyr' data pipelines.

(brook)

R-dplyr: initial commit

A fast, consistent tool for working with data frame like objects, both
in memory and out of memory.

(brook)

R-tidyselect: initial commit

A backend for the selecting functions of the 'tidyverse'. It makes it
easy to implement select-like functions in your own packages in a way
that is consistent with other 'tidyverse' interfaces for selection.

(brook)

R-purrr: initial commit

A complete and consistent functional programming toolkit for R.

(brook)

R-ggtern: initial commit

Extends the functionality of 'ggplot2', providing the capability to
plot ternary diagrams for (subset of) the 'ggplot2' geometries.
Additionally, 'ggtern' has implemented several NEW geometries which
are unavailable to the standard 'ggplot2' release. For further
examples and documentation, please proceed to the 'ggtern' website.

(brook)

R-compositions: initial commit

Provides functions for the consistent analysis of compositional data
(e.g. portions of substances) and positive numbers (e.g.
concentrations) in the way proposed by J. Aitchison and V.
Pawlowsky-Glahn.

(brook)

R-robustbase: initial commit

"Essential" Robust Statistics. Tools allowing to analyze data with
robust methods.  This includes regression methodology including model
selections and multivariate statistics where we strive to cover the
book "Robust Statistics, Theory and Methods" by 'Maronna, Martin and
Yohai'; Wiley 2006.

(brook)

R-tensorA: initial commit

Provides convenience functions for advanced linear algebra with
tensors and computation with datasets of tensors on a higher level
abstraction. It includes Einstein and Riemann summing conventions,
dragging, co- and contravariate indices, parallel computations on
sequences of tensors.

(brook)

R-DEoptimR: initial commit

Differential Evolution (DE) stochastic algorithms for global
optimization of problems with and without constraints. The aim is to
curate a collection of its state-of-the-art variants that (1) do not
sacrifice simplicity of design, (2) are essentially tuning-free, and
(3) can be efficiently implemented directly in the R language.
Currently, it only provides an implementation of the 'jDE' algorithm
by Brest et al. (2006) <doi:10.1109/TEVC.2006.872133>.

(brook)

R-energy: initial commit

E-statistics (energy) tests and statistics for multivariate and
univariate inference, including distance correlation, one-sample,
two-sample, and multi-sample tests for comparing multivariate
distributions, are implemented. Measuring and testing multivariate
independence based on distance correlation, partial distance
correlation, multivariate goodness-of-fit tests, k-groups and
hierarchical clustering based on energy distance, testing for
multivariate normality, distance components (disco) for non-parametric
analysis of structured data, and other energy statistics/methods are
implemented.

(brook)

R-bayesm: initial commit

Covers many important models used in marketing and micro-econometrics
applications. The package includes: Bayes Regression (univariate or
multivariate dep var), Bayes Seemingly Unrelated Regression (SUR),
Binary and Ordinal Probit, Multinomial Logit (MNL) and Multinomial
Probit (MNP), Multivariate Probit, Negative Binomial (Poisson)
Regression, Multivariate Mixtures of Normals (including clustering),
Dirichlet Process Prior Density Estimation with normal base,
Hierarchical Linear Models with normal prior and covariates,
Hierarchical Linear Models with a mixture of normals prior and
covariates, Hierarchical Multinomial Logits with a mixture of normals
prior and covariates, Hierarchical Multinomial Logits with a Dirichlet
Process prior and covariates, Hierarchical Negative Binomial
Regression Models, Bayesian analysis of choice-based conjoint data,
Bayesian treatment of linear instrumental variables models, Analysis
of Multivariate Ordinal survey data with scale usage heterogeneity (as
in Rossi et al, JASA (01)), Bayesian Analysis of Aggregate Random
Coefficient Logit Models as in BLP (see Jiang, Manchanda, Rossi 2009)
For further reference, consult our book, Bayesian Statistics and
Marketing by Rossi, Allenby and McCulloch (Wiley 2005) and Bayesian
Non- and Semi-Parametric Methods and Applications (Princeton U Press
2014).

(brook)

R-latex2exp: initial commit.

Parses and converts LaTeX math formulas to R's plotmath expressions,
used to enter mathematical formulas and symbols to be rendered as
text, axis labels, etc. throughout R's plotting system.

(brook)

Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the
following:

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html

(brook)

Update to version 0.6.

Changes since version 0.5:

* Improve the canonical format of an R package Makefile:

  - Place R_PKGNAME, R_PKGVER, and CATEGORIES in the first stanza.
  - Simplify CATEGORIES by defining common ones in Makefile.extension.
  - Use the default value of HOMEPAGE defined in Makefile.extension.

* Annotate generated comments with [R2pkg] to make them easier to find.

(brook)

Update all R packages to canonical form.

The canonical form [1] of an R package Makefile includes the
following:

- The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as
  needed), and CATEGORIES.

- HOMEPAGE is not present but defined in math/R/Makefile.extension to
  refer to the CRAN web page describing the package.  Other relevant
  web pages are often linked from there via the URL field.

This updates all current R packages to this form, which will make
regular updates _much_ easier, especially using pkgtools/R2pkg.

[1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html

(brook)

Add 'R' to the cateogries for R packages.

The category 'R' is used to denote R packages, just as 'perl5' and 'python'
are used in other cases.  To ensure consistency, add that to CATEGORIES in
Makefile.extension rather than in each individual R package.  This was
discussed in http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html.

(brook)

R-IRkernel: remove a needless GITHUB_PROJECT line.

(brook)

R-RandomFieldsUtils: add a missing buildlink3.mk file.

(brook)

R2pkg: update to version 0.5.

(brook)

R-curl: remove a PLIST that is not needed.

(brook)

Remove a patch that was missed in the previous commit.

(brook)

R-curl: update to version 4.0.

Update to the canonical form of an R package.

(brook)

R-timeDate: update to version 3043.102.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-yaml: update to version 2.2.0.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-utf8: update to version 1.1.4.

Update to the canonical form of an R package.

(brook)

R-stringr: update to version 1.4.0.

Update to the canonical form of an R package.

(brook)

R-stringi: update to version 1.4.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-markdown: update to version 1.0.

Update to the canonical form of an R package.

(brook)

R-jsonlite: update to canonical form of an R package.

(brook)

R-htmltools: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-highr: update to version 0.8.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-gsubfn: update to version 0.7.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-formatR: update to version 1.7.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-digest: update to version 0.6.20.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-knitr: update to version 1.23.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-pbdZMQ: update to version 0.3.3.

Update to the canonical form of an R package.

(brook)

R-pillar: update to version 1.4.2.

Update to the canonical form of an R package.

(brook)

R-zoo: update to version 1.8.6.

Update to the canonical form of an R package.

(brook)

R-xts: update to version 0.11.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-xtable: update to version 1.8.4.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-wle: update to canonical form of an R package.

(brook)

R-tibble: update to version 2.1.3.

Update to the canonical form of an R package.

(brook)

R-statmod: update to version 1.4.32.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-stabledist: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-splancs: update to version 2.01.40.

Update to the canonical form of an R package.

(brook)

R-spacetime: update to version 1.2.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-sp: update to canonical form of an R package.

(brook)

R-shapefiles: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-sgeostat: update to version 1.0.27.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-reshape2: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-randomForest: update to version 4.6.14.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-quantreg: update to version 5.42.1.

Update to the canonical form of an R package.

(brook)

R-quadprog: update to version 1.5.7.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-prob: update to version 1.0.1.

Update to the canonical form of an R package.

(brook)

R-prettyunits: update to canonical form of an R package.

(brook)

R-poweRlaw: update to version 0.70.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-plyr: update to canonical form of an R package.

(brook)

R-pixmap: update to canonical form of an R package.

(brook)

R-pbkrtest: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-numDeriv: update to version 2016.8.1.1.

Update to the canonical form of an R package.

(brook)

R-nloptr: update to version 1.2.1.

Update to the canonical form of an R package.

(brook)

R-ncdf: update to canonical form of an R package.

(brook)

R-mvtnorm: update to version 1.0.11.

Update to the canonical form of an R package.

(brook)

R-minqa: update to canonical form of an R package.

Update to the canonical form of an R package.

(brook)

R-maps: update to version 3.3.0.

Update to the canonical form of an R package.

(brook)

R-mapproj: update to version 1.2.6.

Update to the canonical form of an R package.

(brook)

R-lmtest: update to version 0.9.37.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-lmm: update to version 1.2.

Update to the canonical form of an R package.

(brook)

R-lme4: update to version 1.1.21.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-intervals: update to canonical form of an R package.

(brook)

R-igraph: update to version 1.2.4.1.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-hwde: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-httpRequest: update to version 0.0.10.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-gtools: update to version 3.8.1.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-gtable: update to version 0.3.0.

Update to the canonical form of an R package.

(brook)

R-gstat: update to version 2.0.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-gss: update to version 2.1.10.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-geoRglm: update to version 0.9.11.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-geoR: update to version 1.7.5.2.1.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-genetics: update to version 1.3.8.1.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-gdata: update to version 2.18.0.

Update to the canonical form of an R package.

(brook)

R-fracdiff: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-forecast: update to version 8.7.

Update to the canonical form of an R package.

(brook)

R-emdbook: update to version 1.3.11.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-e1071: update to version 1.7.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-date: update to canonical form of an R package.

(brook)

R-combinat: update to version 0.0.8.

Update to the canonical form of an R package.

(brook)

R-coda: update to version 0.19.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-clim.pact: update to canonical form of an R package.

(brook)

R-classInt: update to version 0.3.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-circular: update to canonical form of an R package.

(brook)

R-chron: update to version 2.3.53.

Update to the canonical form of an R package.

(brook)

R-carData: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-car: update to version 3.0.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-bitops: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-bbmle: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-aplpack: update to version 1.3.2.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-akima: update to canonical form of an R package.

(brook)

R-abind: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-XML: update to version 3.98.1.20.

Update to the canonical form of an R package.

(brook)

R-VGAM: update to version 1.1.1.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-SparseM: update to canonical form of an R package.

(brook)

R-RcppEigen: update to version 0.3.3.5.0.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-RcppArmadillo: update to version 0.9.600.4.0.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-Rcmdr: update to version 2.5.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-RandomFields: update to version 3.3.6.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-RPostgreSQL: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-RNetCDF: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-RColorBrewer: update to canonical form of an R package.

(brook)

R-RArcInfo: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-R2HTML: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-PHYLOGR: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-MatrixModels: update to canonical form of an R package.

(brook)

R-ISwR: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-ISLR: update to canonical form of an R package.

(brook)

R-GRASS: update to canonical form of an R package.

(brook)

R-FNN: update to version 1.1.3.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-DBI: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-DAAG: update to version 1.22.1.

Update to the canonical form of an R package.

(brook)

R-CGIwithR: update to canonical form of an R package.

(brook)

R-BH: update to version 1.69.0.1.

Update to the canonical form of an R package.

(brook)

R-mime: update to version 0.7.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-sourcetools: update to canonical form of an R package.

(brook)

R-codetools: update to version 0.2.16.

Update to the canonical form of an R package and fix the LICENSE
field.  Note that this package is now included within the base R
package, so it is marked with CONFLICTS.

(brook)

R-viridisLite: update to canonical form of an R package.

(brook)

R-scales: update to version 1.0.0.

Update to the canonical form of an R package.

(brook)

R-munsell: update to version 0.5.0.

Update to the canonical form of an R package.

(brook)

R-latticeExtra: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-labeling: update to canonical form of an R package.

(brook)

R-gridExtra: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-ggplot2: update to version 3.2.0.

Update to the canonical form of an R package.

(brook)

R-dichromat: update to canonical form of an R package.

(brook)

R-colorspace: update to version 1.4.1.

Update to the canonical form of an R package.

(brook)

R-Cairo: update to version 1.5.10.

Update to the canonical form of an R package.

(brook)

R-maptools: update to version 0.9.5.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-countrycode: update to version 1.1.0.

Update to the canonical form of an R package.

(brook)

R-tseries: update to version 0.10.47.

Update to the canonical form of an R package.

(brook)

R-timeSeries: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-quantmod: update to version 0.4.15.

Update to the canonical form of an R package.

(brook)

R-fOptions: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-fBasics: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)

R-fAsianOptions: update to canonical form of an R package.

Update to the canonical form of an R package and fix the LICENSE
field.

(brook)