mame: update to 0.243.

Another month has passed, and it窶冱 time for another MAME release!
MAME 0.243 has a few fairly big internal changes, and while we窶决e
working towards making MAME more future-proof, there will likely
be some regressions in the short term. The most noticeable regression
that we窶决e aware of is that rhythm games using DVD media on Konami窶冱
Firebeat platform are now very unhappy with our lack of proper DVD
drive emulation. If you find any other regressions, please report
them 窶� it窶冱 a lot easier to fix things when we know they窶决e broken.

Remember the unreleased arcade version of Rise of the Robots,
running on the RasterSpeed platform? This month sees support added
for another game on the same hardware: Football Crazy. In a clear
demonstration of the benefits of MAME窶冱 modular architecture, this
provides test cases yielding fixes for the CPU, serial controller
and SCSI controller used in the system. Numerous games and computer
systems using the same devices stand to benefit.

MAME窶冱 floppy drive emulation system has had an overhaul this month.
We think we窶况e finally nailed down and fixed the issues that were
causing bad data to be written by the Apple IIgs. Of course, it窶冱
still a good idea to back up your precious disk images. There are
lots of nice fixes for NES/Famicom cartridge support, making a
whole lot of Chinese-language games playable. The driver for the
NEC PC-8801 family has had an overhaul this month, giving more
expansion options and better software compatibility. Also, several
more early Rockwell electronic calculators are now emulated.

As always, there were plenty of bugs squashed this month, including
Midway Seattle and Vegas stability issues, graphical glitches in
The Karate Tournament, erratic joystick movement on the Apple IIgs,
missing sounds in Looping, and quite a few incorrectly labelled
DIP switches.

(wiz)

doc: Updated devel/ocaml-re to 1.10.4

(jaapb)

Updated devel/ocaml-re to version 1.10.4.

Changes are minor improvements and bugfixes.

(jaapb)

doc: Updated devel/ocaml-ppxlib to 0.26.0

(jaapb)

Updated devel/ocaml-ppxlib to version 0.26.0.

Many minor improvements and bugfixes, including support for OCaml 4.14.0.

(jaapb)

doc: Updated devel/ocaml-stdlib-shims to 0.3.0

(jaapb)

Updated devel/ocaml-stdlib-shims to version 0.3.0.

Minor updates, mostly adding support for extra OCaml versions.

(jaapb)

doc: Updated devel/R-testthat to 3.1.4

(mef)

(devel/R-testthat) remove duplicate DEPENDS/TEST_DEPENDS

(mef)

(devel/R-testthat) Update TEST_DEPENDS verison of diffviewer

(mef)

doc: Updated devel/ocaml-sexplib0 to 0.15.0

(jaapb)

(devel/R-testthat) Updated 3.1.3 to 3.1.4

# testthat 3.1.4

* Minor tweaks to output for latest cli (#1606).

(mef)

Updated devel/ocaml-sexplib0 to version 0.15.0.

There's no changelog, so hard to tell what changes there are exactly, but
they seem minor.

(jaapb)

doc: Updated devel/R-cli to 3.3.0

(mef)

(devel/R-cli) Updated 3.2.0 to 3.3.0

# cli 3.3.0

* `style_hyperlink()` no longer breaks if the env varible `VTE_VERSION`
  is of the form `\d{4}`, i.e., 4 consecutive numbers (#441, @michaelchirico)

* `ansi_*()` functions support ANSI hyperlinks again (#444).

* Turning off ANSI colors via the `cli.num_colors` option or the
  `R_CLI_NUM_COLORS` or the `NO_COLOR` environment variable now also turns off
  ANSI hyperlinks (#447).

* `symbol` now only has two variants: UTF-8 and ASCII. There are no special
  variants for RStudio and Windows RGui any more (#424).

(mef)

doc: Updated devel/ocaml-compiler-libs to 0.12.4

(jaapb)

Updated devel/ocaml-compiler-libs to version 0.12.4.

Minor updates and bugfixes only.

(jaapb)

doc: Updated www/R-diffviewer to 0.1.1

(mef)

(www/R-diffviewer) updated 0.1.0 to 0.1.1

# diffviewer 0.1.1

* The diffviewer widget previously ignored some very minor pixel differences,
  but now it will show every difference (#9, #11).

(mef)

doc: Updated devel/ocaml-lwt_react to 1.1.5

(jaapb)

Updated devel/ocaml-lwt_react to version 1.1.5.

This comes with the update of devel/ocaml-lwt to version 5.5.0.

(jaapb)

doc: Updated devel/ocaml-lwt_ppx to 2.0.3

(jaapb)

Updated devel/ocaml-lwt_ppx to version 2.0.3.

This comes with the update of ocaml-lwt to version 5.5.0.

(jaapb)

doc: Updated devel/ocaml-lwt to 5.5.0

(jaapb)

Updated devel/ocaml-lwt to version 5.5.0.

Upstream changes include minor updates and bugfixes, and adding support
for OCaml versions up to 4.14.

(jaapb)

doc: Updated devel/ocaml-seq to 0.2.2

(jaapb)

Updated devel/ocaml-seq to version 0.2.2.

Minor changes, bugfixes and updates only.

(jaapb)

doc: Updated devel/ocaml-ocplib-endian to 1.2

(jaapb)

Updated devel/ocaml-ocplib-endian to version 1.2.

Support fixes and minor additions only.

(jaapb)

doc: Updated devel/ocaml-mmap to 1.2.0

(jaapb)

Updated devel/ocaml-mmap to version 1.2.0.

This uses the bigarray-compat library instead of bigarray.

(jaapb)

doc: Updated devel/ocaml-bigarray-compat to 1.1.0

(jaapb)

Updated devel/ocaml-bigarray-compat to version 1.1.0.

Minor bugfixes only.

(jaapb)

doc: Updated devel/ocaml-migrate-parsetree to 2.3.0

(jaapb)

Updated devel/ocaml-migrate-parsetree to version 2.3.0.

This mostly adds support for OCaml 4.14 (and versions in between); it also
removes some unneeded dependencies and adds some minor bugfixes.

(jaapb)

doc: Updated misc/ocaml-opam-file-format to 2.1.4

(jaapb)

Updated misc/ocaml-file-format to version 2.1.4.

Upstream changes: one minor bugfix.

(jaapb)

doc: Updated geography/R-geosphere to 1.5.14

(mef)

(geography/R-geosphere) Updated 1.5.10 to 1.5.14, explicit NEWS.md unknown

(mef)

Updated devel/py-types-toml, devel/py-types-setuptools

(adam)

py-types-setuptools: updated to 57.4.14

57.4.13 (2022-04-16)

Use `TypeAlias` where possible for type aliases

57.4.12 (2022-04-05)

Mark many attributes as read-only properties

57.4.11 (2022-03-16)

Use PEP 604 syntax wherever possible

57.4.10 (2022-03-08)

Widen the `cmdclass` parameter of `setuptools.setup`

(adam)

py-types-toml: updated to 0.10.6

0.10.6 (2022-04-27)

Remove Python 2 support from toml

0.10.5 (2022-04-16)

Use `TypeAlias` where possible for type aliases

0.10.4 (2022-02-10)

Improve `toml` typings

(adam)

doc: Updated geography/R-deldir to 1.0.6

(mef)

(geography/R-deldir) Updated 0.1.28 to 1.0.6, make test passed

Version 1.0-6 23/10/2021

Fixed a bug that kept deldir() from working when "x" is a
point pattern.

Version 1.0-5 10/10/2021

Changed the protocol for "digging out" x and y, and
"digging out" z.  The rule now is: if the specified argument
is found (located in the global environment, or given explicitly)
then *use* it!  Only if it is *not* found elsewhere should it be
sought in the "x" argument.  (This change was implemented after
Duncan Murdoch convinced me to see the error of my previous ways.)

Adjusted/corrected the processing of generic lists, as the x
argument, in deldir()

Re-wrote the discussion of the argument processing protocol in
deldir.Rd, so as to make it properly reflect the current behaviour
of the function.  It is also hoped that the clarity of the
discussion has been improved.

Fixed various glitches and typos in the code and the help files.

Version 1.0-4 06/10/2021

Fixed more bugs in deldir() w.r.t. argument processing, again
pointed out to me by Duncan Murdoch.

Fixed a bug in triang.list(); it crashed if there were not
any actual triangles in the "triangulation"!

Made an adjustment to plot.triang.list() (added an argument to
specify a colour for the enclosing rectangle.

Version 1.0-3 06/10/2021

Fixed bug in deldir() (more explicitly in digOutz()) that
was pointed out to me by Duncan Murdoch.

Version 1.0-2 05/10/2021

Adjusted plot.deldir() so that it no longer insists that cmpnt_lty
be numeric, but also allows (as it should) the text strings "solid",
"dashed", "dotted", "dotdash", "longdash", and "twodash".

Version 1.0-1 30/09/2021

Modified deldir() so that if argument "x" is a data frame it is
*NOT* required to have columns named "x" and "y".  If there is no
column named "x", the x-coordinates are taken to be the *first*
column named neither "y" nor "z".  Likewise if there is no column
named "y", the y-coordinates are taken to be the *first* column
that is named neither "x" nor "z" and is not equal to the column
previously selected to be the x-coordinates.

Also modified deldir() so that the "x" argument is allowed to be
a matrix.  The same convention that was used when "x" is a data
frame is applied.

This modification was made in response to an observation made by
Jakob Bossek and makes use of a suggestion from Duncan Murdoch.

Version 1.0-0 27/09/2021

Removed/eliminated all traces of the (basically useless) facility
for incorporating dummy points into the triangulation/tessellation.
This facility was a historical artefact that had hung around much
too long.

Made an adjustment to plot.tile.list(); it no longer throws an
error if the border argument is of length greater than 1; it now
simply uses the first entry.

29/09/2021

Ran the *.Rd files through ispell and found and corrected an
embarrassing number of errors.  Did not increment the version
number.

Version 0.2-13 26/09/2021

Made some adjustments to the syntax of deldir() to accommodate
problems encountered with finding the "z" argument.

Changed the position of "z" in the argument list (to follow "x"
and "y").

Got rid of the message being issued on the first call, and the
suppressMessage argument.

Version 0.2-12 28/05/2021

Adjusted the application of "\dontrun{...}" in the help files,
eliminating its unnecessary application in some instances, and
replacinng it by "\donttest{...}" in one instance.

Version 0.2-11 12/05/2021

Changed the terminology in the help and code comments so as to
refer to the entries of the "z" argument as "tags" and not
as "weights".  The latter term is misleading.

Adjusted divchain() so as not to insist that the "z" argument
be a factor.  It may now be a factor or a vector of any mode.
If is not a factor then it is coerced into one.

Added a "tags" component to the list returned by lawSummary().
(This was instigated by an enquiry from Art Stock.)

Version 0.2-10 09/02/2021

Added the cvt() (Centroidal Voronoi Tiles) function at the
request of Micha辿l Aupetit.

Amended deldir() so that the returned object has attributes
"round" (TRUE if argument "round" was TRUE) and "digits"
(equal to the value of argument "digits" if "round" is TRUE,
equal to NA otherwise.)

Made some adjustments to the help for deldir() and plot.tile.list().

Changed the name of Vol.Tri.Points to volTriPoints, so as to make
it more consistent with my usual naming conventions.

Added the "\version" macro.

10/02/2021
Made some adjustments to the help for cvt().

16/02/2021
Submitted to CRAN

Version 0.2-9 16/01/2021

Fixed (???) a bug in doClip() revealed by reverse-dependent package
visualFields.  My logic (using almost.match()) was completely out
to luntch.  Got rid of almost.match() and introduced a new function
findNewInOld() which I *think* does things right.

Adjusted tile.list() so that when it clipps tiles it checks for
the availability of the polyclip package (and throws an error if
this package is not available).

Adjusted the help for plot.tile.list(), doing the same
re-arrangement of plotting colours in one of the examples, as is
used in the help for tilePerim().  The re-arrangement serves to
produce better contrasts between contiguous tiles.

(mef)

doc: Updated geography/R-countrycode to 1.3.1

(mef)

(geography/R-countrycode) Updated 1.3.0 to 1.3.1

# countrycode 1.3.1

* New code: unhcr

(mef)

doc: Updated geography/R-lwgeom to 0.2.8

(mef)

(geography/R-lwgeom) Updated 0.2.7 to 0.2.8, make test passed

# version 0.2-8

* remove PROBLEM ... ERROR constructs from C code

(mef)

+TEST_DEPENDS+= (x4) make test passed

(mef)

py-virtualenv: improve test target, add test status

(wiz)

Updated graphics/py-Willow, sysutils/py-filetype

(adam)

py-filetype: updated to 1.0.13

v1.0.13 / 2022-04-21
====================

  * chore(version): bump patch
  * chore(version): bump patch
  * refactor(apng)
  * refactor(apng)
  * Merge pull request 120
  * fix typo
  * add APNG support (part 3)
  *  add APNG support (part 2)
  * add APNG support (part 1)

v1.0.12 / 2022-04-19
====================

  * Merge branch 'master' of https://github.com/h2non/filetype.py
  * feat: version bump
  * Merge pull request 118
  * fix(font): minimum length check (woff)
  * Add support for more WOFF/WOFF2 flavors

(adam)

py-Willow: updated to 1.4.1

Version 1.4.1

Drop support for Python 3.4
Imagemagick 7 compatibility fixes
Fix: Implemented consistent behaviour between Pillow and Wand for out-of-bounds crop rectangles

(adam)

doc/TODO: + gdb-12.1.

(wiz)

Updated devel/py-ZopeConfiguration, lang/py-mypy

(adam)

py-mypy: updated to 0.950

0.950
Pinning Third-Party Library Stub Versions
Concatenate and Literals with ParamSpec
Detect Unused Coroutines and Awaitables
assert_type

(adam)

py-ZopeConfiguration: updated to 4.4.1

4.4.1 (2022-04-07)
------------------

- Avoid creating reference cycles through tracebacks in ``reraise`` (change
  imported from ``six``).

- Add support for Python 3.9, 3.10.

(adam)

Updated devel/py-wrapt, net/py-lexicon

(adam)

py-lexicon: updated to 3.10.0

3.10.0

Added

Add --zone-id CLI flag for route53 provider
Add yandexcloud provider dedicated to Yandex Cloud solution

Modified

Improve documentation with auto-generation
Clarify that yandex provider supports Yandex PDD only
Use UUIDs in aliyun provider to avoid nonce collisions

(adam)

py-wrapt: updated to 1.14.1

Version 1.14.1

Bugs Fixed

When the post import hooks mechanism was being used, and a Python package with its own custom module importer was used, importing modules could fail if the custom module importer didn't use the latest Python import hook finder/loader APIs and instead used the deprecated API. This was actually occurring with the zipimporter in Python itself, which was not updated to use the newer Python APIs until Python 3.10.

(adam)

Updated graphics/wcslib to 7.11

(wen)

Update to 7.11

Upstream changes:
WCSLIB version 7.11 (2022/04/26)
--------------------------------

* C library

  - In tabini(), the default index array should contain a 1-relative
    sequence: {1, 2,... N}.  Previously it was 0-relative.

WCSLIB version 7.10 (2022/04/24)
--------------------------------

* C library

  - In tabcpy(), collapse degenerate table index arrays if they are
    collapsed in the source struct.  Minor fix for output formatting
    in tabprt().

  - In the C test suite, added calls to wcstrim() in twcsfix to tidy
    the structs before printing.

* Utilities

  - The default option in wcsware now trims the wcsprm struct before
    printing it.  Use the '-p' option to print the untrimmed struct.

WCSLIB version 7.9 (2022/03/26)
-------------------------------

* C library

  - In wcsset(), bug fix for identifying time coordinate axes.
    Reported by Mihai Cara with patch.

WCSLIB version 7.8 (2022/03/25)
-------------------------------

* C library

  - In wcssub(), bug fix for tabular coordinates that change axis
    number, thus requiring tabprm::map to be updated.  Reported by
    Mihai Cara with patch.

    Also in wcssub():
      - check that all axes of a multi-dimensional table are extracted
        together,
      - fixed potential memory leaks for tabular coordinate axes when
        an attempt to subimage non-separable axes fails,
      - the error messages for non-separable coordinate systems are
        generally more informative,
      - subimage extraction by coordinate type now recognises time
        coordinate axis types via WCSSUB_TIME.

  - wcsset() now identifies time coordinate axes in wcsprm::types.

  - Extended test program twcssub to test the above modifications.

* Installation

  - Bug fix in the utils makefile for creating $(MANDIR)/man1.
    Reported by Aleksander Kurek.

  - Bug fix in the Fortran makefile for compiling and using 'tofits'.
    Reported by Stefan Br���ns.

* User manual

  - Documentation generation moved to doxygen 1.9.3 (was 1.9.1).

WCSLIB version 7.7 (2021/07/12)
-------------------------------

* C library

  - In disfree() and disset(), removed potential for double invokation
    of free() on allocated memory.  Reported by Cyril Richard.

  - In wcsutil_fptr2str(), fixed a bug reported by Ralf Palsa (with fix)
    that caused it to be overly enthusiastic in stripping leading zeroes
    off addresses of function pointers.

  - In wcspcx(), replaced variable length arrays with allocated memory
    (portability issue).  Reported by Mihai Cara with patch.

  - Fixed buglets in wcsbth() and linsize() uncovered by gcc 11.1.0.

  - Quelled inconsequential compiler warnings from gcc 11.1.0 concerning
    wcsmix() (function prototype in wcs.h), wcstrim(), wcseulexe(),
    wcsulex(), and wcsutrne().

  - Defined _POSIX_C_SOURCE appropriately in tprj2.c and tspc.c to get
    the function prototype etc. for nanosleep() from time.h.

* Fortran wrappers

  - Quelled numerous inconsequential compiler warnings from gfortran
    11.1.0.

  - Fixed minor bugs uncovered by gfortran 11.1.0 in test programs tdis2
    and ttab3.

* Utilities

  - Moved 'tofits' from ./C/test/ into the utilities directory as it's
    generally useful, and added usage (converted to man page).

    Also made it a bit smarter in dealing with ISO/IEC 8859 and UTF-8
    encoded byte streams, in particular translating non-breaking spaces
    into ordinary spaces.

* Installation

  - Two patches for configure.ac provided by Mos��� Giordano:
    1. makes it possible to build the Windows library using the MinGW
      cross-compiler,
    2. makes the soname of the MacOSX library consistent with other
      Unix systems.

WCSLIB version 7.6 (2021/04/13)
-------------------------------

* C library

  - Bug fix in tabs2x() triggered for 1-dimensional coordinate lookup
    tables on axes > 1.  Reported by Mihai Cara.

  - In datfix(), don't return status 0 if no change was made (fix for
    change made at release 7.4).  Reported by Derek Homeier.

  - New function wcspcx() in the wcsfix suite regularizes the linear
    transformation component of a coordinate description to make it more
    human-readable.  It decomposes CDi_ja into PCi_ja and CDELTia in
    such a way that CDELTia forms meaningful scaling parameters, often
    leaving an orthogonal or near-orthogonal matrix.  Optionally, it can
    then permute rows of this matrix to unscramble axis permutations.

    A test header may be generated from wcspcx.keyrec for input to
    wcsware (not exercised as part of the standard test suite).

  - New function wcstrim() frees memory allocated by wcsinit() for
    arrays in a wcsprm struct that remain unused after the struct has
    been set up.

  - New functions wcssize(), auxsize(), tabsize(), linsize(), dissize(),
    celsize(), prjsize(), spcsize(), and wcserr_size() compute the total
    size of the relevant structs, including allocated memory.

  - In the C test suite, inserted a brief pause in tprj2 and tspc, which
    otherwise have now become a blur.

* Fortran wrappers

  - Added wrappers for wcspcx(), wcstrim(), wcssize(), auxsize(),
    tabsize(), linsize(), dissize(), celsize(), prjsize(), spcsize(),
    and wcserr_size().

* Utilities

  - Added -c, -cp, -C, and -Cp options to wcsware to apply wcspcx()
    in a variety of ways, -m to apply wcstrim(), and -z to report the
    total size of the wcsprm struct with a breakdown of the sizes of
    its constituent structs.

  - Fixed compiler warnings for sundazel (portability issue).

* Installation

  - Upped the required version of Flex to 2.6.0 (was 2.5.9).  Problems
    with Flex 2.5.39 reported by Derek Homeier.

    Also added '--disable-flex' as a new configure option to force the
    use of the pre-generated Flex sources.

WCSLIB version 7.5 (2021/03/20)
-------------------------------

The C code in WCSLIB is moving piecemeal to the C99 standard.  In fact,
various indispensible C99 constructs have been used in WCSLIB for many
years: the long long int data type (in fitshdr() only); stdint.h,
inttypes.h, and the use of PRI formatting control (in wcsprintf(), which
is widely used by the library); and the C99-extended library function
vsnprintf() (used by wcserr for a decade).  Flex-generated C code also
uses C99 extensions, though with workarounds if they are not available.

Except in the header prologues, which are formatted in a special way for
generating the user manual, comments were changed en masse to C99 style
in release 7.3.1, and variable declarations in code that I have occasion
to modify will transition to the more general placement allowed by C99.
However, I have no plans to use any of the more esoteric features of
C99.

* C library

  - New function, wcsccs(), changes the celestial coordinate system of a
    wcsprm struct, for example, from equatorial to galactic coordinates.
    The parameters that define the spherical coordinate transformation
    must be provided.  This allows WCSLIB to provide this functionality
    without needing to know anything about specific celestial coordinate
    systems, and has the advantage of making the routine completely
    general.  Requested by Mohammad Akhlaghi.

    Modified test program twcsfix also to test wcsccs().

  - Fixed a problem common to all of the Flex code (fitshdr, wcsbth,
    wcspih, wcsulex, and wcsutrn) that made it thread-unsafe.  Reported
    by Cyril Richard.

    Added a new test program, tpthreads, to test thread safety.  It is
    only used for code development, and not exercised as part of the
    standard test suite.

  - In fitshdr(), fixed a problem that potentially could arise on
    systems where sizeof(long long int) is greater than 8 (64 bits).

* Fortran wrappers

  - Match changes to the C library: added a wrapper for wcsccs(), and
    modified twcsfix.f.

  - Because null addresses cannot be passed to functions in Fortran,
    wcssub_() now interprets *nsub == -1 && *axes == -1 as a signal to
    do a deep copy of one wcsprm struct to another.

* Utilities

  - New utility, sundazel, computes the local time of the Sun's passage
    through the specified apparent longitude or latitude in a user-
    defined coordinate system.  It can also perform several other Solar
    related calculations.  (It is unrelated to FITS WCS, and does not
    use WCSLIB.)

* Installation

  - Added an 'uninstall' rule to the makefiles.  Suggested by
    Cyril Richard.

WCSLIB version 7.4 (2021/01/31)
-------------------------------

* C library

  - In wcshdo(), fixed a bug introduced in release 5.9 that potentially
    caused loss of numerical precision in the sprintf() formatting of
    floating point keyvalues.  This was triggered when a large range of
    CRPIXja, PCi_ja, or CDELTia values (as three separate groups) were
    formatted using an 'f' format descriptor, the range not being so
    large that it would have forced wcshdo() to revert to 'E' format.
    Reported by Mohammad Akhlaghi.

    Also in wcshdo(), fixed a bug introduced in release 7.1 that caused
    the coefficients of the TPD distortion function not to be written to
    the header.  TPD and Polynomial distortion function headers will now
    always include the DPja.DOCORR keyword.  Reported by Derek Homeier
    with patch.

  - In wcsset(), fixed a segv generated in attempting to report a non-
    standard units string with wcserr message reporting disabled.
    Reported by Mohammad Akhlaghi.

    In wcsutrne(), allow 'Angstroms' and 'angstroms' as additional
    synonyms for 'Angstrom'.

  - In datfix(), ensure that 0 is returned if an informational message
    is set in wcsprm::err.  Consequent on feedback independently from
    Mihai Cara and Bruce Merry.

    Clarified that informational messages may be set in wcsprm::err
    for returns of 0 from datfix(), obsfix(), unitfix(), and spcfix().

* User manual

  - Added cautions about translating CDi_ja to PCi_ja plus CDELTia for
    those historical distortion functions (TPV, TNX, ZPX) that expect to
    operate on intermediate world coordinates, rather than intermediate
    pixel coordinates.  Consequent on feedback from Mohammad Akhlaghi.

  - Documentation generation moved to doxygen 1.9.1 (was 1.8.19).

WCSLIB version 7.3.1 (2020/08/17)
---------------------------------

There are no functional changes in this release.

* C library
* Fortran wrappers
* PGSBOX
* Utilities

  - Changed all C code, including within the flex sources, Fortran and
    PGSBOX wrappers, and test suite, to use C99 style commenting (i.e.
    using //), excluding the header prologues used to generate the user
    manual.

* User manual

  - Documentation generation moved to doxygen 1.8.19 (was 1.8.18).

WCSLIB version 7.3 (2020/06/03)
-------------------------------

* C library

  - wcshdo() was writing MJD-OBS twice to the header, and MJD-BEG not
    at all.

  - In wcshdo(), if MJDREF assumes its default value, just write
    MJDREF = 0 (not MJDREFI & MJDREFF), and omit writing DATEREF,
    which, with a value of '1858-11-17', looks strange and is
    potentially confusing.  Reported by Thomas Robitaille.

    If the fractional part of MJDREF is zero, then just write the
    integer part as MJDREF (i.e. not as MJDREFI & MJDREFF).

  - Bug fix in wcsfix() - it was writing error messages that referred
    to DATE-REF and MJD-REF rather then DATEREF and MJDREF.  Reported
    by Mihai Cara.

  - Under control of a new flag, WCSHDR_DATEREF, added the option to
    wcspih() and wcsbth() to accept DATE-REF, MJD-REF, MJD-REFI,
    MJD-REFF, JDREF, JD-REFI, and JD-REFF as synonyms for the standard
    keywords, DATEREF, MJDREF, MJDREFI, MJDREFF, JDREF, JDREFI, and
    JDREFF.  The latter buck the pattern set by the other date keywords
    ({DATE,MJD}-{OBS,BEG,AVG,END}), thereby increasing the potential
    for confusion and error.

* Fortran wrappers

  - As compilers are becoming much stricter (gfortran 10), modified all
    Fortran test programs to use the type-specific equivalents of the
    various *PUT and *GET routines.  Reported by Ole Streicher.

  - For the fitshdr wrappers, added type-specific equivalents of
    KEYGET: KEYGTI, KEYGTD, and KEYGTC.

* PGSBOX

  - Modified pgtest to use the type-specific equivalents of WCSPUT.

* User manual

  - In the section "WCSLIB Fortran wrappers", promoted use of the type-
    specific equivalents of the various *PUT and *GET routines.

  - In the section "FITS-WCS and related software", added ASCL and ADS
    codes, where they exist, for all software packages mentioned.

  - Documentation generation moved to doxygen 1.8.18 (was 1.8.17).

(wen)

drupal9: use php/json.mk

(wiz)

php-orangehrm: use php/json.mk

Untested, but similar to phpmyadmin5

(wiz)

doc: Updated geography/R-wk to 0.6.0

(mef)

(geography/R-wk) Updated 0.5.0 to 0.6.0

# wk 0.6.0

* Fixed `wk_affine_rescale()` to apply the translate and scale
  operations in the correct order (#94).
* Add `wk_handle_slice()` and `wk_chunk_map_feature()` to support
  a chunk + apply workflow when working with large vectors (#101, #107).
* C and R code was rewritten to avoid materializing ALTREP vectors
  (#103, #109).
* Added a `wk_crs_proj_definition()` generic for foreign CRS objects
  (#110, #112).
* Added `wk_crs_longlat()` helper to help promote authority-compliant
  CRS choices (#112).
* Added `wk_is_geodesic()`, `wk_set_geodesic()`, and argument `geodesic`
  in `wkt()` and `wkb()` as a flag for objects whose edges must
  be interpolated along a spherical/ellipsoidal trajectory (#112).
* Added `sf::st_geometry()` and `sf::st_sfc()` methods for wk geometry
  vectors for better integration with sf (#113, #114).
* Refactored well-known text parser to be more reusable and faster
  (#115, #104).
* Minor performance enhancement for `is.na()` and `validate_wk_wkb()`
  when called on a very long `wkb()` vector (#117).
* Fixed issue with `validate_wk_wkb()` and `validate_wk_wkt()`, which failed
  for most valid objects (#119).
* Added `wk_envelope()` and `wk_envelope_handler()` to compute feature-wise
  bounding boxes (#120, #122).
* Fixed headers and tests to pass on big endian systems (#105, #122).
* Incorporated the geodesic attribute into vctrs methods, data frame
  columns, and bbox/envelope calculation (#124, #125).
* Fix `as_xy()` for nested data frames and geodesic objects (#126, #128).
* Remove deprecated `wkb_problems()`, `wkt_problems()`, `wkb_format()`,
  and `wkt_format()` (#129).
* `wk_plot()` is now an S3 generic (#130).

(mef)

tex package updates

(markd)

texlive-collection-publishers: update to revision 63161

(markd)

texlive-collection-plaingeneric: update to revision 63165

(markd)

texlive-collection-mathscience: update to revision 63188

(markd)

texlive-collection-latexextra: update to revision 63140

(markd)

texlive-collection-langfrench: update to revision 63147

(markd)

texlive-collection-langenglish: update to revision 63184

(markd)

texlive-collection-fontsextra: update to revision 63169

(markd)

tex-linearA{,-doc}: update to 2022
texlive lowercased the package name.

(markd)

tex-circuitikz{,-doc}: update to 1.5.1

- Do not load package `regexpatch` by default

(markd)

Updated graphics/freetype2, www/py-asgiref

(adam)

py-asgiref: updated to 3.5.1

3.5.1 (2022-04-30)
------------------
* sync_to_async in thread-sensitive mode now works corectly when the
  outermost thread is synchronous

(adam)

freetype2: updated to 2.12.1

FreeType 2.12.1

This is a maintenance release. All users should upgrade.

(adam)

doc: Updated devel/binaryen to 106

(fcambus)

binaryen: update to 106.

v106
----

- [wasm2js] Support exports of Globals (#4523)
- MergeSimilarFunctions optimization pass (#4414)
- Various wasm-ctor-eval improvements, including support for GC.

(fcambus)

doc: Updated net/dbip-country-lite to 2022.05

(fcambus)

dbip-country-lite: update to 2022.05.

No upstream ChangeLog.

(fcambus)

doc: Updated net/dbip-city-lite to 2022.05

(fcambus)

dbip-city-lite: update to 2022.05.

No upstream ChangeLog.

(fcambus)

doc: Updated net/dbip-asn-lite to 2022.05

(fcambus)

dbip-asn-lite: update to 2022.05.

No upstream ChangeLog.

(fcambus)

doc: Updated devel/mob to 3.1.3

(schmonz)

Update to 3.1.3. From the changelog:

- Fixes a bug where mob hides output of interactive git hooks when
  `MOB_GIT_HOOKS_ENABLED=true`. And without output, the user doesn't
  know what to input. And without input, mob waits indefinitely.

(schmonz)

doc: Updated math/R-tidyr to 1.2.0

(mef)

(math/R-tidyr) Updated 1.1.3 to 1.2.0

# tidyr 1.2.0

## Pivoting

* `pivot_wider()` gains new `names_expand` and `id_expand` arguments for turning
  implicit missing factor levels and variable combinations into explicit ones.
  This is similar to the `drop` argument from `spread()` (#770).

* `pivot_wider()` gains a new `names_vary` argument for controlling the
  ordering when combining `names_from` values with `values_from` column names
  (#839).

* `pivot_wider()` gains a new `unused_fn` argument for controlling how to
  summarize unused columns that aren't involved in the pivoting process (#990,
  thanks to @mgirlich for an initial implementation).

* `pivot_longer()`'s `names_transform` and `values_transform` arguments now
  accept a single function which will be applied to all of the columns
  (#1284, thanks to @smingerson for an initial implementation).

* `pivot_longer()`'s `names_ptypes` and `values_ptypes` arguments now
  accept a single empty ptype which will be applied to all of the columns
  (#1284).

## Nesting

* `unnest()` and `unchop()`'s `ptype` argument now accepts a single empty
  ptype which will be applied to all `cols` (#1284).

* `unpack()` now silently skips over any non-data frame columns specified by
  `cols`. This matches the existing behavior of `unchop()` and `unnest()`
  (#1153).

## Rectangling

* `unnest_wider()` and `unnest_longer()` can now unnest multiple columns at
  once (#740).

* `unnest_longer()`'s `indices_to` and `values_to` arguments now accept
  a glue specification, which is useful when unnesting multiple columns.

* For `hoist()`, `unnest_longer()`, and `unnest_wider()`, if a `ptype` is
  supplied, but that column can't be simplified, the result will be a list-of
  column where each element has type `ptype` (#998).

* `unnest_wider()` gains a new `strict` argument which controls whether or not
  strict vctrs typing rules should be applied. It defaults to `FALSE` for
  backwards compatibility, and because it is often more useful to be lax
  when unnesting JSON, which doesn't always map one-to-one with R's types
  (#1125).

* `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `simplify` argument now
  accepts a named list of `TRUE` or `FALSE` to control simplification on a per
  column basis (#995).

* `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `transform` argument now
  accepts a single function which will be applied to all components (#1284).

* `hoist()`, `unnest_longer()`, and `unnest_wider()`'s `ptype` argument now
  accepts a single empty ptype which will be applied to all components (#1284).

## Grids

* `complete()` gains a new `explicit` argument for limiting `fill` to only
  implicit missing values. This is useful if you don't want to fill in
  pre-existing missing values (#1270).

* `complete()` gains a grouped data frame method. This generates a more correct
  completed data frame when groups are involved (#396, #966).

* `complete()` and `expand()` no longer allow you to complete or expand on a
  grouping column. This was never well-defined since completion/expansion on a
  grouped data frame happens "within" each group and otherwise has the
  potential to produce erroneous results (#1299).

## Missing values

* `drop_na()`, `replace_na()`, and `fill()` have been updated to utilize vctrs.
  This means that you can use these functions on a wider variety of column
  types, including lubridate's Period types (#1094), data frame columns, and
  the [rcrd](https://vctrs.r-lib.org/reference/new_rcrd.html) type from vctrs.

* `replace_na()` no longer allows the type of `data` to change when the
  replacement is applied. `replace` will now always be cast to the type of
  `data` before the replacement is made. For example, this means that using a
  replacement value of `1.5` on an integer column is no longer allowed.
  Similarly, replacing missing values in a list-column must now be done with
  `list("foo")` rather than just `"foo"`.

* `replace_na()` no longer replaces empty atomic elements in list-columns
  (like `integer(0)`). The only value that is replaced in a list-column is
  `NULL` (#1168).

* `drop_na()` no longer drops empty atomic elements from list-columns
  (like `integer(0)`). The only value that is dropped in a list-column is
  `NULL` (#1228).

## Bug fixes and minor improvements

### General

* @mgirlich is now a tidyr author in recognition of his significant and
  sustained contributions.

* All lazyeval variants of tidyr verbs have been soft-deprecated. Expect them
  to move to the defunct stage in the next minor release of tidyr (#1294).

* `any_of()` and `all_of()` from tidyselect are now re-exported (#1217).

* dplyr >= 1.0.0 is now required.

### Pivoting

* `pivot_wider()` now gives better advice about how to identify duplicates when
  values are not uniquely identified (#1113).

* `pivot_wider()` now throws a more informative error when `values_fn` doesn't
  result in a single summary value (#1238).

* `pivot_wider()` and `pivot_longer()` now generate more informative
  errors related to name repair (#987).

* `pivot_wider()` now works correctly when `values_fill` is a data frame.

* `pivot_wider()` no longer accidentally retains `values_from` when pivoting
  a zero row data frame (#1249).

* `pivot_wider()` now correctly handles the case where an id column name
  collides with a value from `names_from` (#1107).

* `pivot_wider()` and `pivot_longer()` now both check that the spec columns
  `.name` and `.value` are character vectors. Additionally, the `.name`
  column must be unique (#1107).

* `pivot_wider()`'s `names_from` and `values_from` arguments are now
  required if their default values of `name` and `value` don't correspond to
  columns in `data`. Additionally, they must identify at least 1 column
  in `data` (#1240).

* `pivot_wider()`'s `values_fn` argument now correctly allows anonymous
  functions (#1114).

* `pivot_wider_spec()` now works correctly with a 0-row data frame and a `spec`
  that doesn't identify any rows (#1250, #1252).

* `pivot_longer()`'s `names_ptypes` argument is now applied after
  `names_transform` for consistency with the rectangling functions
  (i.e. `hoist()`) (#1233).

* `check_pivot_spec()` is a new developer facing function for validating a pivot
  `spec` argument. This is only useful if you are extending `pivot_longer()` or
  `pivot_wider()` with new S3 methods (#1087).

### Nesting

* The `nest()` generic now avoids computing on `.data`, making it more
  compatible with lazy tibbles (#1134).

* The `.names_sep` argument of the data.frame method for `nest()` is now
  actually used (#1174).

* `unnest()`'s `ptype` argument now works as expected (#1158).

* `unpack()` no longer drops empty columns specified through `cols` (#1191).

* `unpack()` now works correctly with data frame columns containing 1 row but
  0 columns (#1189).

* `chop()` now works correctly with data frames with 0 rows (#1206).

* `chop()`'s `cols` argument is no longer optional. This matches the
  behavior of `cols` seen elsewhere in tidyr (#1205).

* `unchop()` now respects `ptype` when unnesting a non-list column (#1211).

### Rectangling

* `hoist()` no longer accidentally removes elements that have duplicated names
  (#1259).

### Grids

* The grouped data frame methods for `complete()` and `expand()` now move the
  group columns to the front of the result (in addition to the columns you
  completed on or expanded, which were already moved to the front). This should
  make more intuitive sense, as you are completing or expanding "within" each
  group, so the group columns should be the first thing you see (#1289).

* `complete()` now applies `fill` even when no columns to complete are
  specified (#1272).

* `expand()`, `crossing()`, and `nesting()` now correctly retain `NA` values of
  factors (#1275).

* `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now silently
  apply name repair to automatically named inputs. This avoids a number of
  issues resulting from duplicate truncated names
  (#1116, #1221, #1092, #1037, #992).

* `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now allow
  columns from unnamed data frames to be used in expressions after that
  data frame was specified, like `expand_grid(tibble(x = 1), y = x)`. This
  is more consistent with how `tibble()` behaves.

* `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now work
  correctly with data frames containing 0 columns but >0 rows (#1189).

* `expand_grid()`, `expand()`, `nesting()`, and `crossing()` now return a 1
  row data frame when no inputs are supplied, which is more consistent with
  `prod() == 1L` and the idea that computations involving the number of
  combinations computed from an empty set should return 1 (#1258).

### Missing values

* `drop_na()` no longer drops missing values from all columns when a tidyselect
  expression that results in 0 columns being selected is used (#1227).

* `fill()` now treats `NaN` like any other missing value (#982).

# tidyr 1.1.4

* `expand_grid()` is now about twice as fast and `pivot_wider()` is a bit faster
  (@mgirlich, #1130).

* `unchop()` is now much faster, which propagates through to various functions,
  such as `unnest()`, `unnest_longer()`, `unnest_wider()`, and
  `separate_rows()` (@mgirlich, @DavisVaughan, #1127).

* `unnest()` is now much faster (@mgirlich, @DavisVaughan, #1127).

* `unnest()` no longer allows unnesting a list-col containing a mix of vector
  and data frame elements. Previously, this only worked by accident, and is
  considered an off-label usage of `unnest()` that has now become an error.

(mef)

doc: Added net/trippy version 0.2.0

(pin)

Add trippy

(pin)

net/trippy: import package

A network diagnostic tool, inspired by mtr, https://github.com/traviscross/mtr

Trippy uses a raw socket which require elevated privileges. Enabling the
required privilege can be achieved in several ways.

Trippy is made possible by tui-rs , crossterm & pnet as well as several common
foundational Rust libraries.

(pin)

doc: Updated textproc/R-readr to 2.1.2

(mef)

(textproc/R-readr) Updated 2.0.1 to 2.1.2

# readr 2.1.2

* `read_table()`, `read_log()`, and `read_delim_chunked()` (and
  friends) gain the `show_col_types` argument found elsewhere. All
  `read_*()` functions now respect the `show_col_types` argument or
  option, even when using the first edition parsing engine (#1331).

* `show_progress()` uses `rlang::is_interactive()` instead of
  `base::interactive()` (#1356).

* `read_builtin()` does more argument checking, so that we catch
  obviously malformed input before passing along to `utils::data()`
  (#1361).

* `chickens.csv` and `whitespace-sample.txt` are new example datasets
  accessible via `readr_example()` (#1354).

# readr 2.1.1

* Jenny Bryan is now the maintainer.

* Fix buffer overflow when trying to parse an integer from a field
  that is over 64 characters long (#1326)

# readr 2.1.0

* All readr functions again read eagerly by default. Unfortunately
  many users experienced frustration from the drawbacks of lazy
  reading, in particular locking files on Windows, so it was decided
  to disable lazy reading default.  However `options(readr.read_lazy =
  TRUE)` can be used to set the default to by lazy if desired.

* New `readr.read_lazy` global option to control if readr reads files
  lazily or not (#1266)

# readr 2.0.2

* minor test tweak for compatibility with testthat 3.1.0 (#@lionel-, #1304)

* `write_rds()` gains a `text=` argument, to control using a text
  based object representation, like the `ascii=` argument in
  `saveRDS()` (#1270)

(mef)

(textproc/R-spelling) +TEST_DEPENDS+=, but still one missing

(mef)