Changes 5.6.25:
Functionality Added or Changed
* MySQL Enterprise Firewall operates on parser states and does not work well together with the query cache, which circumvents the parser. MySQL Enterprise Firewall now checks whether the query cache is enabled. If so, it displays a message that the query cache must be disabled and does not load.

* my_print_defaults now masks passwords. To display passwords in cleartext, use the new --show option.

* MySQL distributions now include an innodb_stress suite of test cases. Thanks to Mark Callaghan for the contribution.

Bugs Fixed
* InnoDB; Partitioning: The CREATE_TIME column of the INFORMATION_SCHEMA.TABLES table now shows the correct table creation time for partitioned InnoDB tables. The CREATE_TIME column of the INFORMATION_SCHEMA.PARTITIONS table now shows the correct partition creation time for a partition of partitioned InnoDB tables.

The UPDATE_TIME column of the INFORMATION_SCHEMA.TABLES table now shows when a partitioned InnoDB table was last updated by an INSERT, DELETE, or UPDATE. The UPDATE_TIME column of the INFORMATION_SCHEMA.PARTITIONS table now shows when a partition of a partitioned InnoDB table was last updated.

* InnoDB: An assertion was raised on shutdown due to XA PREPARE transactions holding explicit locks.

* InnoDB: The strict_* forms of innodb_checksum_algorithm settings (strict_none, strict_innodb, and strict_crc32) caused the server to halt when a non-matching checksum was encountered, even though the non-matching checksum was valid. For example, with innodb_checksum_algorithm=strict_crc32, encountering a valid innodb checksum caused the server to halt. Instead of halting the server, a message is now printed to the error log and the page is accepted as valid if it matches an innodb, crc32 or none checksum.

* InnoDB: The memcached set command permitted a negative expire time value. Expire time is stored internally as an unsigned integer. A negative value would be converted to a large number and accepted. The maximum expire time value is now restricted to INT_MAX32 to prevent negative expire time values.

* InnoDB: Removal of a foreign key object from the data dictionary cache during error handling caused the server to exit.

* InnoDB: SHOW ENGINE INNODB STATUS output showed negative reservation and signal count values due to a counter overflow error.

* InnoDB: Failure to check the status of a cursor transaction read-only option before reusing the cursor transaction for a write operation resulted in a server exit during a memcached workload.

* InnoDB: MDL locks taken by memcached clients caused a MySQL Enterprise Backup FLUSH TABLES WITH READ LOCK operation to hang.

* InnoDB: Estimates that were too low for the size of merge chunks in the result sorting algorithm caused a server exit.

* InnoDB: For full-text searches, the optimizer could choose an index that does not produce correct relevancy rankings.

* Partitioning: When creating a partitioned table, partition-level DATA DIRECTORY or INDEX DIRECTORY option values that contained an excessive number of characters were handled incorrectly.

* Partitioning: Executing an ALTER TABLE on a partitioned table on which a write lock was in effect could cause subsequent SQL statements on this table to fail.

* Replication: When binary logging was enabled, using stored functions and triggers resulting in a long running procedure that inserted many records caused the memory use to increase rapidly. This was due to memory being allocated per variable. The fix ensures that in such a situation, memory is allocated once and the same memory is reused.

* Replication: If an error was encountered while adding a GTID to the received GTID set, the log lock was not being correctly released. This could cause a deadlock.

more...

(adam)

Changes 5.5.44:
Bugs fixed:
* InnoDB; Partitioning: The CREATE_TIME column of the INFORMATION_SCHEMA.TABLES table now shows the correct table creation time for partitioned InnoDB tables. The CREATE_TIME column of the INFORMATION_SCHEMA.PARTITIONS table now shows the correct partition creation time for a partition of partitioned InnoDB tables.

The UPDATE_TIME column of the INFORMATION_SCHEMA.TABLES table now shows when a partitioned InnoDB table was last updated by an INSERT, DELETE, or UPDATE. The UPDATE_TIME column of the INFORMATION_SCHEMA.PARTITIONS table now shows when a partition of a partitioned InnoDB table was last updated.

* InnoDB: An assertion was raised on shutdown due to XA PREPARE transactions holding explicit locks.

* InnoDB: Removal of a foreign key object from the data dictionary cache during error handling caused the server to exit.

* InnoDB: SHOW ENGINE INNODB STATUS output showed negative reservation and signal count values due to a counter overflow error.

* InnoDB: Estimates that were too low for the size of merge chunks in the result sorting algorithm caused a server exit.

* SHOW VARIABLES mutexes were being locked twice, resulting in a server exit.

* A Provides rule in RPM .spec files misspelled ���mysql-embedded��� as ���mysql-emdedded���.

* Under certain conditions, the libedit command-line library could write outside an array boundary and cause a client program crash.

* Host value matching for the grant tables could fail to use the most specific of values that contained wildcard characters.

* A user with a name of event_scheduler could view the Event Scheduler process list without the PROCESS privilege.

* SHOW GRANTS after connecting using a proxy user could display the password hash of the proxied user.

* For a prepared statement with an ORDER BY that refers by column number to a GROUP_CONCAT() expression that has an outer reference, repeated statement execution could cause a server exit.

* Loading corrupt spatial data into a MyISAM table could cause the server to exit during index building.

* Certain queries for the INFORMATION_SCHEMA TABLES and COLUMNS tables could lead to excessive memory use when there were large numbers of empty InnoDB tables.

* MySQL failed to compile using OpenSSL 0.9.8e.

(adam)

pullup #4721

(hiramatsu)

Pullup ticket #4721 - requested by taca
lang/ruby21-base: build fix

Revisions pulled up:
- pkgsrc/lang/ruby21-base/Makefile                              1.12
- pkgsrc/lang/ruby21-base/distinfo                              1.17
- pkgsrc/lang/ruby21-base/patches/patch-configure              1.4
- pkgsrc/lang/ruby21-base/patches/patch-lib_mkmf.rb            1.1

---
  Module Name:    pkgsrc
  Committed By:  sevan
  Date:          Wed Apr 22 19:04:56 UTC 2015

  Modified Files:
          pkgsrc/lang/ruby21-base: distinfo
          pkgsrc/lang/ruby21-base/patches: patch-configure

  Log Message:
  Remove mention of MirBSD in patch description as support is there by default now

  Reviewed by wiz@

---
  Module Name:    pkgsrc
  Committed By:  taca
  Date:          Thu Apr 30 03:27:20 UTC 2015

  Modified Files:
          pkgsrc/lang/ruby21-base: Makefile distinfo
  Added Files:
          pkgsrc/lang/ruby21-base/patches: patch-lib_mkmf.rb

  Log Message:
  Avoid to generate empty command line on some platforms:

  $(DLLIB): $(OBJS) Makefile
  ...
          $(Q) $(POSTLINK)

  And POSTLINK is empty macro.  In such case, GNU make ignore empty command
  line but BSD make tries to execute it and causes error.

  Bump PKGREVISION.

(hiramatsu)

Remove double whitespace.
Fix odd comma location.

(ryoon)

Update git packages to 2.4.2.

(ryoon)

Update git packages to 2.4.2

Changelog:
Git v2.4.2 Release Notes
========================

Fixes since v2.4.1
------------------

* "git rev-list --objects $old --not --all" to see if everything that
  is reachable from $old is already connected to the existing refs
  was very inefficient.

* "hash-object --literally" introduced in v2.2 was not prepared to
  take a really long object type name.

* "git rebase --quiet" was not quite quiet when there is nothing to
  do.

* The completion for "log --decorate=" parameter value was incorrect.

* "filter-branch" corrupted commit log message that ends with an
  incomplete line on platforms with some "sed" implementations that
  munge such a line.  Work it around by avoiding to use "sed".

* "git daemon" fails to build from the source under NO_IPV6
  configuration (regression in 2.4).

* "git stash pop/apply" forgot to make sure that not just the working
  tree is clean but also the index is clean. The latter is important
  as a stash application can conflict and the index will be used for
  conflict resolution.

* We have prepended $GIT_EXEC_PATH and the path "git" is installed in
  (typically "/usr/bin") to $PATH when invoking subprograms and hooks
  for almost eternity, but the original use case the latter tried to
  support was semi-bogus (i.e. install git to /opt/foo/git and run it
  without having /opt/foo on $PATH), and more importantly it has
  become less and less relevant as Git grew more mainstream (i.e. the
  users would _want_ to have it on their $PATH).  Stop prepending the
  path in which "git" is installed to users' $PATH, as that would
  interfere the command search order people depend on (e.g. they may
  not like versions of programs that are unrelated to Git in /usr/bin
  and want to override them by having different ones in /usr/local/bin
  and have the latter directory earlier in their $PATH).

Also contains typofixes, documentation updates and trivial code
clean-ups.

(ryoon)

Updated www/php-ja-wordpress to 4.2.2

(ryoon)

Update to 4.2.2

Changelog:
WordPress 4.2.2 Security and Maintenance Release
Posted May 7, 2015 by Samuel Sidler. Filed under Releases, Security.

WordPress 4.2.2 is now available. This is a critical security release for all previous versions and we strongly encourage you to update your sites immediately.

Version 4.2.2 addresses two security issues:

    The Genericons icon font package, which is used in a number of popular themes and plugins, contained an HTML file vulnerable to a cross-site scripting attack. All affected themes and plugins hosted on WordPress.org (including the Twenty Fifteen default theme) have been updated today by the WordPress security team to address this issue by removing this nonessential file. To help protect other Genericons usage, WordPress 4.2.2 proactively scans the wp-content directory for this HTML file and removes it. Reported by Robert Abela of Netsparker.
    WordPress versions 4.2 and earlier are affected by a critical cross-site scripting vulnerability, which could enable anonymous users to compromise a site. WordPress 4.2.2 includes a comprehensive fix for this issue. Reported separately by Rice Adu and Tong Shi.

The release also includes hardening for a potential cross-site scripting vulnerability when using the visual editor. This issue was reported by Mahadev Subedi.

Our thanks to those who have practiced responsible disclosure of security issues.

WordPress 4.2.2 also contains fixes for 13 bugs from 4.2. For more information, see the release notes or consult the list of changes.

Download WordPress 4.2.2 or venture over to Dashboard → Updates and simply click “Update Now.” Sites that support automatic background updates are already beginning to update to WordPress 4.2.2.

Thanks to everyone who contributed to 4.2.2:

Aaron Jorbin, Andrew Ozz, Andrew Nacin, Boone Gorges, Dion Hulse, Ella Iseulde Van Dorpe, Gary Pendergast, Hinaloe, Jeremy Felt, John James Jacoby, Konstantin Kovshenin, Mike Adams, Nikolay Bachiyski, taka2, and willstedt.

rdPress.org

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    Plugins
    Mobile
    Support
    Get Involved
    About
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    Download WordPress

WordPress 4.2.2 Security and Maintenance Release
Posted May 7, 2015 by Samuel Sidler. Filed under Releases, Security.

WordPress 4.2.2 is now available. This is a critical security release for all previous versions and we strongly encourage you to update your sites immediately.

Version 4.2.2 addresses two security issues:

    The Genericons icon font package, which is used in a number of popular themes and plugins, contained an HTML file vulnerable to a cross-site scripting attack. All affected themes and plugins hosted on WordPress.org (including the Twenty Fifteen default theme) have been updated today by the WordPress security team to address this issue by removing this nonessential file. To help protect other Genericons usage, WordPress 4.2.2 proactively scans the wp-content directory for this HTML file and removes it. Reported by Robert Abela of Netsparker.
    WordPress versions 4.2 and earlier are affected by a critical cross-site scripting vulnerability, which could enable anonymous users to compromise a site. WordPress 4.2.2 includes a comprehensive fix for this issue. Reported separately by Rice Adu and Tong Shi.

The release also includes hardening for a potential cross-site scripting vulnerability when using the visual editor. This issue was reported by Mahadev Subedi.

Our thanks to those who have practiced responsible disclosure of security issues.

WordPress 4.2.2 also contains fixes for 13 bugs from 4.2. For more information, see the release notes or consult the list of changes.

Download WordPress 4.2.2 or venture over to Dashboard → Updates and simply click “Update Now.” Sites that support automatic background updates are already beginning to update to WordPress 4.2.2.

Thanks to everyone who contributed to 4.2.2:

Aaron Jorbin, Andrew Ozz, Andrew Nacin, Boone Gorges, Dion Hulse, Ella Iseulde Van Dorpe, Gary Pendergast, Hinaloe, Jeremy Felt, John James Jacoby, Konstantin Kovshenin, Mike Adams, Nikolay Bachiyski, taka2, and willstedt.
Share this:

WordPress 4.2.1 Security Release
Posted April 27, 2015 by Gary Pendergast. Filed under Releases, Security.

WordPress 4.2.1 is now available. This is a critical security release for all previous versions and we strongly encourage you to update your sites immediately.

A few hours ago, the WordPress team was made aware of a cross-site scripting vulnerability, which could enable commenters to compromise a site. The vulnerability was discovered by Jouko Pynnönen.

WordPress 4.2.1 has begun to roll out as an automatic background update, for sites that support those.

For more information, see the release notes or consult the list of changes.

Download WordPress 4.2.1 or venture over to Dashboard → Updates and simply click “Update Now”.

WordPress 4.2
An easier way to share content
Extended character support
Switch themes in the Customizer
Even more embeds
Streamlined plugin updates

Under the Hood
utf8mb4 support

Database character encoding has changed from utf8 to utf8mb4, which adds support for a whole range of new 4-byte characters.
JavaScript accessibility

You can now send audible notifications to screen readers in JavaScript with wp.a11y.speak(). Pass it a string, and an update will be sent to a dedicated ARIA live notifications area.
Shared term splitting

Terms shared across multiple taxonomies will be split when one of them is updated. Find out more in the Plugin Developer Handbook.
Complex query ordering

WP_Query, WP_Comment_Query, and WP_User_Query now support complex ordering with named meta query clauses.

(ryoon)

Make this package build on Ruby 2.2.

(taca)

Note update of audio/ruby-mp3info package to 0.8.6.

(taca)

Update ruby-mp3info to 0.8.6.

=== 0.8.6 / 2015-03-28

* fixed frame size computation (thanks to ekaminski)
* now correctly close the @io (thanks to cyberroot)
* correctly compute length of VBR files (fixes #42)

(taca)

This package is built with ruby22.

(taca)

Note update of lang/pear package to 1.9.5nb4.

(taca)

Update included  Archive_Tar to 1.3.16.

* Fix Bug #20514: invalid package.xml; not installable with pyrus [mrook]

Bump PKGREVISION.

(taca)

Updated math/R-intervals to 0.15.0

(wen)

Update to 0.15.0

No upstream changelog found.

(wen)

Pullup ticket #4734.

(tron)

Pullup ticket #4734 - requested by bsiegert
sysutils/file: security patch

Revisions pulled up:
- sysutils/file/Makefile                                        1.35
- sysutils/file/distinfo                                        1.23
- sysutils/file/patches/patch-src_softmagic.c                  1.1

---
  Module Name:    pkgsrc
  Committed By:  bsiegert
  Date:          Sat May 23 13:11:07 UTC 2015

  Modified Files:
          pkgsrc/sysutils/file: Makefile distinfo
  Added Files:
          pkgsrc/sysutils/file/patches: patch-src_softmagic.c

  Log Message:
  SECURITY: add patch for denial-of-service vulnerability. From Matthias
  Ferdinand via pkgsrc-users. Bump PKGREVISION.

(tron)

Updated devel/waf to 1.8.10

(wiz)

Update to 1.8.10:

NEW IN WAF 1.8.10
-----------------
* Replace cygwin paths in solution files - https://github.com/waf-project/waf/issues/1562
* Fixed the hcode in why.py - https://github.com/waf-project/waf/issues/1561
* Enabled execution from any folder: "waf configure --top=/arbitrary/folder --out=/tmp/build"
* Enabled stateless out-of-tree builds by default: "waf configure --no-lock-in-top --no-lock-in-run"
* Fixed the waf file generation on windows in Waf 1.8.9
* Add OS flags such as LDFLAGS only once - https://github.com/waf-project/waf/issues/1574
* Fixed conf.multicheck error handling

(wiz)

Updated time/py-vdirsyncer to 0.5.1

(wiz)

Update to 0.5.1:

Version 0.5.1
=============

*released on 29 May 2015*

- **N.b.: The PyPI upload of 0.5.0 is completely broken.**
- Raise version of required requests-toolbelt to ``0.4.0``.
- Command line should be a lot faster when no work is done, e.g. for help
  output.
- Fix compatibility with iCloud again.
- Use only one worker if debug mode is activated.
- ``verify=false`` is now disallowed in vdirsyncer, please use
  ``verify_fingerprint`` instead.
- Fixed a bug where vdirsyncer's DAV storage was not using the configured
  useragent for collection discovery.

(wiz)

Updated net/py-twisted to 15.2.1

(wiz)

Update to 15.2.1:

Twisted Core 15.2.1 (2015-05-23)
================================

Bugfixes
--------
- twisted.logger now marks the `isError` key correctly on legacy
  events generated by writes to stderr. (#7903)

Improved Documentation
----------------------
- twisted.logger's documentation is now correctly listed in the table
  of contents. (#7904)

(wiz)

Updated www/py-tornado to 4.2

(wiz)

Update to 4.2:

What's new in Tornado 4.2
=========================

May 26, 2015
------------

Backwards-compatibility notes
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

* ``SSLIOStream.connect`` and `.IOStream.start_tls` now validate certificates
  by default.
* Certificate validation will now use the system CA root certificates instead
  of ``certifi`` when possible (i.e. Python 2.7.9+ or 3.4+). This includes
  `.IOStream` and ``simple_httpclient``, but not ``curl_httpclient``.
* The default SSL configuration has become stricter, using
  `ssl.create_default_context` where available on the client side.
  (On the server side, applications are encouraged to migrate from the
  ``ssl_options`` dict-based API to pass an `ssl.SSLContext` instead).
* The deprecated classes in the `tornado.auth` module, ``GoogleMixin``,
  ``FacebookMixin``, and ``FriendFeedMixin`` have been removed.

New modules: `tornado.locks` and `tornado.queues`
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

These modules provide classes for coordinating coroutines, merged from
`Toro <http://toro.readthedocs.org>`_.

To port your code from Toro's queues to Tornado 4.2, import `.Queue`,
`.PriorityQueue`, or `.LifoQueue` from `tornado.queues` instead of from
``toro``.

Use `.Queue` instead of Toro's ``JoinableQueue``. In Tornado the methods
`~.Queue.join` and `~.Queue.task_done` are available on all queues, not on a
special ``JoinableQueue``.

Tornado queues raise exceptions specific to Tornado instead of reusing
exceptions from the Python standard library.
Therefore instead of catching the standard `queue.Empty` exception from
`.Queue.get_nowait`, catch the special `tornado.queues.QueueEmpty` exception,
and instead of catching the standard `queue.Full` from `.Queue.get_nowait`,
catch `tornado.queues.QueueFull`.

To port from Toro's locks to Tornado 4.2, import `.Condition`, `.Event`,
`.Semaphore`, `.BoundedSemaphore`, or `.Lock` from `tornado.locks`
instead of from ``toro``.

Toro's ``Semaphore.wait`` allowed a coroutine to wait for the semaphore to
be unlocked *without* acquiring it. This encouraged unorthodox patterns; in
Tornado, just use `~.Semaphore.acquire`.

Toro's ``Event.wait`` raised a ``Timeout`` exception after a timeout. In
Tornado, `.Event.wait` raises `tornado.gen.TimeoutError`.

Toro's ``Condition.wait`` also raised ``Timeout``, but in Tornado, the `.Future`
returned by `.Condition.wait` resolves to False after a timeout::

    @gen.coroutine
    def await_notification():
        if not (yield condition.wait(timeout=timedelta(seconds=1))):
            print('timed out')
        else:
            print('condition is true')

In lock and queue methods, wherever Toro accepted ``deadline`` as a keyword
argument, Tornado names the argument ``timeout`` instead.

Toro's ``AsyncResult`` is not merged into Tornado, nor its exceptions
``NotReady`` and ``AlreadySet``. Use a `.Future` instead. If you wrote code like
this::

    from tornado import gen
    import toro

    result = toro.AsyncResult()

    @gen.coroutine
    def setter():
        result.set(1)

    @gen.coroutine
    def getter():
        value = yield result.get()
        print(value)  # Prints "1".

Then the Tornado equivalent is::

    from tornado import gen
    from tornado.concurrent import Future

    result = Future()

    @gen.coroutine
    def setter():
        result.set_result(1)

    @gen.coroutine
    def getter():
        value = yield result
        print(value)  # Prints "1".

`tornado.autoreload`
~~~~~~~~~~~~~~~~~~~~

* Improved compatibility with Windows.
* Fixed a bug in Python 3 if a module was imported during a reload check.

`tornado.concurrent`
~~~~~~~~~~~~~~~~~~~~

* `.run_on_executor` now accepts arguments to control which attributes
  it uses to find the `.IOLoop` and executor.

`tornado.curl_httpclient`
~~~~~~~~~~~~~~~~~~~~~~~~~

* Fixed a bug that would cause the client to stop processing requests
  if an exception occurred in certain places while there is a queue.

`tornado.escape`
~~~~~~~~~~~~~~~~

* `.xhtml_escape` now supports numeric character references in hex
  format (``&#x20;``)

`tornado.gen`
~~~~~~~~~~~~~

* `.WaitIterator` no longer uses weak references, which fixes several
  garbage-collection-related bugs.
* `tornado.gen.Multi` and `tornado.gen.multi_future` (which are used when
  yielding a list or dict in a coroutine) now log any exceptions after the
  first if more than one `.Future` fails (previously they would be logged
  when the `.Future` was garbage-collected, but this is more reliable).
  Both have a new keyword argument ``quiet_exceptions`` to suppress
  logging of certain exception types; to use this argument you must
  call ``Multi`` or ``multi_future`` directly instead of simply yielding
  a list.
* `.multi_future` now works when given multiple copies of the same `.Future`.
* On Python 3, catching an exception in a coroutine no longer leads to
  leaks via ``Exception.__context__``.

`tornado.httpclient`
~~~~~~~~~~~~~~~~~~~~

* The ``raise_error`` argument now works correctly with the synchronous
  `.HTTPClient`.
* The synchronous `.HTTPClient` no longer interferes with `.IOLoop.current()`.

`tornado.httpserver`
~~~~~~~~~~~~~~~~~~~~

* `.HTTPServer` is now a subclass of `tornado.util.Configurable`.

`tornado.httputil`
~~~~~~~~~~~~~~~~~~

* `.HTTPHeaders` can now be copied with `copy.copy` and `copy.deepcopy`.

`tornado.ioloop`
~~~~~~~~~~~~~~~~

* The `.IOLoop` constructor now has a ``make_current`` keyword argument
  to control whether the new `.IOLoop` becomes `.IOLoop.current()`.
* Third-party implementations of `.IOLoop` should accept ``**kwargs``
  in their `~.IOLoop.initialize` methods and pass them to the superclass
  implementation.
* `.PeriodicCallback` is now more efficient when the clock jumps forward
  by a large amount.

`tornado.iostream`
~~~~~~~~~~~~~~~~~~

* ``SSLIOStream.connect`` and `.IOStream.start_tls` now validate certificates
  by default.
* New method `.SSLIOStream.wait_for_handshake` allows server-side applications
  to wait for the handshake to complete in order to verify client certificates
  or use NPN/ALPN.
* The `.Future` returned by ``SSLIOStream.connect`` now resolves after the
  handshake is complete instead of as soon as the TCP connection is
  established.
* Reduced logging of SSL errors.
* `.BaseIOStream.read_until_close` now works correctly when a
  ``streaming_callback`` is given but ``callback`` is None (i.e. when
  it returns a `.Future`)

`tornado.locale`
~~~~~~~~~~~~~~~~

* New method `.GettextLocale.pgettext` allows additional context to be
  supplied for gettext translations.

`tornado.log`
~~~~~~~~~~~~~

* `.define_logging_options` now works correctly when given a non-default
  ``options`` object.

`tornado.process`
~~~~~~~~~~~~~~~~~

* New method `.Subprocess.wait_for_exit` is a coroutine-friendly
  version of `.Subprocess.set_exit_callback`.

`tornado.simple_httpclient`
~~~~~~~~~~~~~~~~~~~~~~~~~~~

* Improved performance on Python 3 by reusing a single `ssl.SSLContext`.
* New constructor argument ``max_body_size`` controls the maximum response
  size the client is willing to accept. It may be bigger than
  ``max_buffer_size`` if ``streaming_callback`` is used.

`tornado.tcpserver`
~~~~~~~~~~~~~~~~~~~

* `.TCPServer.handle_stream` may be a coroutine (so that any exceptions
  it raises will be logged).

`tornado.util`
~~~~~~~~~~~~~~

* `.import_object` now supports unicode strings on Python 2.
* `.Configurable.initialize` now supports positional arguments.

`tornado.web`
~~~~~~~~~~~~~

* Key versioning support for cookie signing. ``cookie_secret`` application
  setting can now contain a dict of valid keys with version as key. The
  current signing key then must be specified via ``key_version`` setting.
* Parsing of the ``If-None-Match`` header now follows the RFC and supports
  weak validators.
* Passing ``secure=False`` or ``httponly=False`` to
  `.RequestHandler.set_cookie` now works as expected (previously only the
  presence of the argument was considered and its value was ignored).
* `.RequestHandler.get_arguments` now requires that its ``strip`` argument
  be of type bool. This helps prevent errors caused by the slightly dissimilar
  interfaces between the singular and plural methods.
* Errors raised in ``_handle_request_exception`` are now logged more reliably.
* `.RequestHandler.redirect` now works correctly when called from a handler
  whose path begins with two slashes.
* Passing messages containing ``%`` characters to `tornado.web.HTTPError`
  no longer causes broken error messages.

`tornado.websocket`
~~~~~~~~~~~~~~~~~~~

* The ``on_close`` method will no longer be called more than once.
* When the other side closes a connection, we now echo the received close
  code back instead of sending an empty close frame.

(wiz)

Updated devel/py-setuptools to 17.0

(wiz)

Update to 17.0:

17.0
----

* Issue #378: Do not use internal importlib._bootstrap module.
* Issue #390: Disallow console scripts with path separators in
  the name. Removes unintended functionality and brings behavior
  into parity with pip.

(wiz)

Updated devel/py-cffi to 1.1.0

(wiz)

Update to 1.1.0:

1.1.0
=====

* Out-of-line API mode: we can now declare integer types with
  ``typedef int... foo_t;``.  The exact size and signness of ``foo_t``
  is figured out by the compiler.

* Out-of-line API mode: we can now declare multidimensional arrays
  (as fields or as globals) with ``int n[...][...]``.  Before, only the
  outermost dimension would support the ``...`` syntax.

* Out-of-line ABI mode: we now support any constant declaration,
  instead of only integers whose value is given in the cdef.  Such "new"
  constants, i.e. either non-integers or without a value given in the
  cdef, must correspond to actual symbols in the lib.  At runtime they
  are looked up the first time we access them.  This is useful if the
  library defines ``extern const sometype somename;``.

* ``ffi.addressof(lib, "func_name")`` now returns a regular cdata object
  of type "pointer to function".  You can use it on any function from a
  library in API mode (in ABI mode, all functions are already regular
  cdata objects).  To support this, you need to recompile your cffi
  modules.

* Issue #198: in API mode, if you declare constants of a ``struct``
  type, what you saw from lib.CONSTANT was corrupted.

* Issue #196: ``ffi.set_source("package._ffi", None)`` would
  incorrectly generate the Python source to ``package._ffi.py`` instead
  of ``package/_ffi.py``.  Also fixed: in some cases, if the C file was
  in ``build/foo.c``, the .o file would be put in ``build/build/foo.o``.

(wiz)

Updated textproc/pod2mdoc to 0.2

(wiz)

Update to 0.2:

0.2:

* SYNOPSIS preprocessor lines use Fd.
* Names found in the SYNOPSIS are remembered using Marc Espie's
  ohash library (bundled for compatibility with operating systems
  lacking it); that information is used subsequently to mark up
  function names with Fn, function arguments with Fa, type names
  with Vt, preprocessor macros with Dv.
* Foreign function names are marked up with Xr.
* Whitespace handling has been improved in many respects (blank
  lines in literal displays; re-wrap text lines; new sentence, new
  line; better horizontal spacing; no more whitespace at the end
  of lines).
* Improved handling of closing punctuation.
* Escaping of quotes at the beginning of macro arguments.

(wiz)

Updated misc/dialog to 1.2.20150528

(wiz)

Update to 1.2.20150528:

2015/05/28
+ fixes for two autoconf macros, CF_ADD_INCDIR and CF_NCURSES_CONFIG
  from work on ncurses.
+ build-fix for NetBSD curses (patch by Matthias Scheler).

(wiz)

Updated devel/p5-Data-Printer to 0.36

(wiz)

Update to 0.36:

0.36 2015-05-29
    Bumping 0.35_01 to stable,
    with the single addition of the 'scalar_quotes' patch.

    NEW FEATURES:
        - 'scalar_quotes' let you specify the quote to use when,
          well, quoting (Ivan Bessarabov)

(wiz)

Updated math/R-lmm to 1.0

(wen)

Update to 1.0

Upstream changes:
Version 1.0

2015-02-10 Convert rngs to real function in accordance with pan
Cast rangen explicitly as real
Revise DESCRIPTION and remove .Rinstignore

(wen)

Updated devel/p5-Test-Pod to 1.50

(wiz)

Update to 1.50:

1.50  2015-05-28T21:42:48Z
    * Restored support for ignoring directories listed in
      `%Test::Pod::ignore_dirs`, inadvertently dropped by the switch to
      File::Find in v1.46. Thanks to Julien ��LIE for the report and diagnosis!

(wiz)

Bump PKGREVISION for hs-dlist-0.7.1.1

(szptvlfn)

Updated math/R-mapproj to 1.2.2

(wen)

Updated devel/hs-dlist to 0.7.1.1

(szptvlfn)

Update to 1.2.2

No upstream changelog found.

(wen)

Update to 0.7.1.1

ChangeLog:
Version 0.7.1.1 (2015-03-19) *St Joseph's Day*
----------------------------------------------

#### Package changes

* Change QuickCheck upper bound from 2.8 to 2.9

(szptvlfn)

Updated www/p5-CGI to 4.20

(wiz)

Update to 4.20:

4.20 2015-05-29

    [ RELEASE NOTES ]
    - CGI.pm is now considered "done". See also "mature" and "legacy"
      Features requests and none critical issues will be outright rejected.
      The module is now in maintenance mode for critical issues only.

    - This release removes the AUTOLOAD and compile optimisations from CGI.pm
      that were introduced into CGI.pm twenty (20) years ago as a response to
      its large size, which meant there was a significant compile time penalty.

    - This optimisation is no longer relevant and makes the code difficult to
      deal with as well as making test coverage metrics incorrect. Benchmarks
      show that advantages of AUTOLOAD / lazy loading / deferred compile are
      less than 0.05s, which will be dwarfed by just about any meaningful code
      in a cgi script. If this is an issue for you then you should look at
      running CGI.pm in a persistent environment (FCGI, etc)

    - To offset some of the time added by removing the AUTOLOAD functionality
      the dependencies have been made runtime rather than compile time. The
      POD has also been split into its own file. CGI.pm now contains around
      4000 lines of code, which compared to some modules on CPAN isn't really
      that much

    - This essentially deprecates the -compile pragma and ->compile method. The
      -compile pragma will no longer do anything, whereas the ->compile method
      will raise a deprecation warning. More importantly this also REMOVES the
      -any pragma because as per the documentation this pragma needed to be
      "used with care or not at all" and allowing arbitrary HTML tags is almost
      certainly a bad idea. If you are using the -any pragma and using arbitrary
      tags (or have typo's in your code) your code will *BREAK*

    - Although this release should be back compatible (with the exception of any
      code using the -any pragma) you are encouraged to test it throughly as if
      you are doing anything out of the ordinary with CGI.pm (i.e. have bugs
      that may have been masked by the AUTOLOAD feature) you may see some issues.

    - References: GH #162, GH #137, GH #164

    [ SPEC / BUG FIXES ]
    - make the list context warning in param show the filename rather than
      the package so we have more information on exactly where the warning
      has been raised from (GH #171)
    - correct self_url when PATH_INFO and SCRIPT_NAME are the same but we
      are not running under IIS (GH #176)
    - Add the multi_param method to :cgi export (thanks to xblitz for the patch
      and tests. GH #167)
    - Fix warning for lack of HTTP_USER_AGENT in CGI::Carp (GH #168)
    - Fix imports when called from CGI::Fast, restores the import of CGI functions
      into the callers namespace for users of CGI::Fast (GH leejo/cgi-fast#11 and
      GH leejo/cgi-fast#12)

    [ FEATURES ]
    - CGI::Carp now has $CGI::Carp::FULL_PATH for displaying the full path to the
      offending script in error messages
    - CGI now has env_query_string() for getting the value of QUERY_STRING from
      the environment and not that fiddled with by CGI.pm (which is what
      query_string() does) (GH #161)
    - CGI::ENCODE_ENTITIES var added to control which chracters are encoded by
      the call to the HTML::Entities module - defaults to &<>"' (GH #157 - the
      \x8b and \x9b chars have been removed from this list as we are concerned
      more about unicode compat these days than old browser support.)

    [ DOCUMENTATION ]
    - Fix some typos (GH #173, GH #174)
    - All *documentation* for HTML functionality in CGI has been moved into
      its own namespace: CGI::HTML::Functions - although the functionality
      continues to exist within CGI.pm so there are no code changes required
      (GH #142)
    - Add missing documentation for env variable fetching routines (GH #163)

    [ TESTING ]
    - Increase test coverage (GH #3)

    [ INTERNALS ]
    - Cwd made a TEST_REQUIRES rather than a BUILD_REQUIRES in Makefile.PL
      (GH #170)
    - AutoloadClass variables have been removed as AUTOLOAD was removed in
      v4.14 so these are no longer necessary (GH #172 thanks to alexmv)
    - Remove dependency on constant - internal DEBUG, XHTML_DTD and EBCDIC
      constants changes to $_DEBUG, $_XHTML_DTD, and $_EBCDIC

(wiz)

Updated devel/p5-Error to 0.17024

(wiz)

Update to 0.17024:

May 30 2015 <shlomif@shlomifish.org> (Shlomi Fish)

  Error.pm #0.17024
  - Add link to the VCS repository in META.yml

(wiz)

Updated math/R-maps to 2.3.9

(wen)

Update to 2.3.9

No upstream changelog found.

(wen)

Updated math/R-mvtnorm to 1.0.2

(wen)

Update to 1.0.2

Upstream changes:
Changes in version 1.0-2 (2014-12-16)

  o  start providing C interfaces to the underlying algorithms.
    mvtnorm_C_mvtdst() directly calls Alan's FORTRAN code and
    can be used in other packages via LinkingTo. See
    mvtnorm/inst/C_API_Example for an example very much inspired
    by the example provided in package xts.

  o  provide .C interfaces to the FORTRAN routines and allow switching
    on/off of R' RNG.

Changes in version 1.0-1 (2014-11-11)

  o  replace internal MVCHNV FORTRAN FUNCTION with
    R's sqrt(qchisq(p, n, FALSE, FALSE). This fixes a
    problem where NaN was returned as reported by
    David Charles Airey <airey_david_charles_at_lilly.com>

Changes in version 1.0-0 (2014-07-08)

  o  After 14 years, we now feel safe enough to publish mvtnorm 1.0-0.
    Many packages depend, import, or suggest mvtnorm, so this version
    change also indicates that the package is now stable and, to a very
    large extent, the API is frozen. We will of course continue to fix
    bugs or other problems but new features are unlikely to go into this
    package.

  o  use Authors@R in DESCRIPTION

  o  switch to standard NEWS format

(wen)

Replace interpreter path in installed file. Bump PKGREVISION.

(wiz)

Fix PLIST.

(wiz)

Replace interpreter path in installed file. Bump PKGREVISION.

(wiz)

Replace perl interpreter path in installed file. Bump PKGREVISION

(wiz)

Updated devel/SDL to 1.2.15nb18

(nat)

Updated devel/SDL2 to 2.0.3nb9

(nat)

Remove delay whilst writing audio.  Improves latency.
Bump PKGREVISION.

This commit was approved by wiz@

(nat)

Remove delay whilst writing audio.  Improves latency.
Make it so wscons video will initialize without keyboard and mouse.

This commit was approved by wiz@

(nat)

NeoPop-SDL removal.

(wiz)

Remove NeoPop-SDL. Development has stopped, last release was from 2004,
mess is better suited if you want to emulate this.

(wiz)

+ MesaLib-10.5.6, dialog-1.2.20150528, git-base-2.4.2, py-cffi-1.1.0,
  py-setuptools-17.0, py-tornado-4.2, py-twisted-15.2.1,
  py-vdirsyncer-0.5.1, waf-1.8.10.

(wiz)

Add packages in texlive formatsextra collection.

(markd)

Depend on more stuff, install less.

(markd)

Add dependencies to complete collection.

(markd)

Add packages from texlive formatsextra collection.

(markd)

Add packages from texlive formatsextra collection.

(markd)

Add tex-bussproofs

(markd)

Updated math/R-plyr to 1.8.2

(wen)

Update to 1.8.2

No Upstream changelog found.

(wen)

Build requires USE_TOOLS+=m4 - fixes build on Linux.

(dsainty)

Fix python check.

(markd)

Remove fonts/tex-afm2pl-doc entry - was a mistake.

(markd)

Remove tex-afm2pl-doc

(markd)

Remove the tex-afm2pl-doc package. Contents are in afm2pl.

(markd)

Fix PLIST.

(markd)

Fix PLIST.

(markd)

Fix PLIST.

(markd)

Fix PLIST.

(markd)

Updated math/R-randomForest to 4.6.10

(wen)

Update to 4.6.10

Upstream changes:
Changes in 4.6-10:

* Fixed bugs introduced in 4.6-8 and 4.6-9. Levels for ordered factors
  in predictors are no longer checked for consistency between training
  and test data in predict.randomForest().  In 4.6-9 the response is mean
  centered before running the algorithm (for regression), but the mean was
  not added back in the $y component of the return object from
  randomForest().

Changes in 4.6-9:

* Categorical predictors are allowed to have up to 53 categories now.

Changes in 4.6-8:

* There was a bug in the handling of ordered factors in randomForest.formula().
  (Reported by Barry Rawlingson.)

* Changed randomForest.formula() and predict.randomForest() so that
  predict() without newdata when na.action=na.exclude pads the output
  with NAs to match the rows in the original data (suggested by Barry
  Rawlingson.).

* There was a long standing bug in randomForest(..., proximity=TRUE, oob.prox=FALSE)
  in regression mode. (Thanks to Stefano Romano for the report.)

(wen)

Updated math/R-spacetime to 1.1.4

(wen)

Update to 1.1.4
Update DEPENDS

Upstream changes:
commit 3083307fc8ebf938673028cf7ffc3ccff6a4cac6
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Apr 24 13:56:40 2015 +0200

    upgrade to match sp 1.1-0

commit 5e7950336984a567c0f07abb019930dbaf068abb
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Mar 17 14:21:20 2015 +0100

    docs for expand.range

commit 58d8db3d8863eee96aeea1cf458fbee2e42b32db
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Mar 17 14:18:44 2015 +0100

    range of at was too small; report by Roland Harhoff

commit af552c7e902b69979f309bcf1f795bc7cf782f11
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Mar 17 13:56:53 2015 +0100

    add drop=FALSE to data.frame selector

commit 8ac495755ea13ef90b9e378ec26b963ea316174b
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Mar 13 16:20:47 2015 +0100

    adding +ellps= to CRS arguments, for PROJ 4.9.1

commit 393bb24344b7b3648086ecadf5bf287bdea4fcde
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Mar 5 00:12:50 2015 +0100

    replace unstack with reshape; clean check

commit 45bf1588eef7e2ddbf07f843333d72f0a99d0e4f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Mar 4 20:27:51 2015 +0100

    stplot mode = "xt" for factor: plots as number but no longer crashes

commit b7e51d1720dace123a73669ee04b77255a0b9c09
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Mar 4 19:07:27 2015 +0100

    stplot factor variables when mode = "xy"

commit 24671c67b17293749937d7c955a80ce8e12ac619
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Feb 11 10:51:18 2015 +0100

    make stsdf[1,1] do sth more sensible

commit e7d26c403722f6dfe08f27bbbe82644e2f48976e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 28 12:13:49 2015 +0100

    improve error message

commit f37ad515f35e21f9351c290437f2948f34b5f894
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 28 10:25:09 2015 +0100

    enable check on duplicate attributes for STSDF

commit 995dd6d742143bf9fcc4d43c19c358f9a4bc626c
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Jan 27 23:34:52 2015 +0100

    adopt new behaviour for STFDF too

commit 08fcfb9f1555e283c82107256c055a5bead0b265
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Jan 27 23:18:42 2015 +0100

    add timeIndex to xts output on single pt subset; report from Jon Skoien;

commit 68d9420d6a9bad79f3b84c656cbfc9f670fe5a28
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Jan 24 10:19:17 2015 +0100

    remove rgeos dependency in sto.Rnw, add DE to air.rda

commit 097d3a0fbc63f2ef7773825c07d35eafa3ab3cba
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 21 23:20:34 2015 +0100

    make rgeos requirement conditional

commit cddc6c9ac45dfc7664c7e5b3adbcc65b0f499961
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 21 09:08:18 2015 +0100

    bump version

commit 218a99f5b7b475353f8b37246c945c47f881f6aa
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Jan 19 14:55:57 2015 +0100

    correct timeIndex order for as.data.frame.STS, reported by Jon Skoien

commit 6502ebfd51b6704669c46d26c8dd2b7304c630ef
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Jan 17 23:05:15 2015 +0100

    conditional require(rgeos) in example

commit 3f4f8a5c3e6048393ad14fd4444ec03773207dc9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Jan 15 13:05:22 2015 +0100

    more spTransform

commit a29c98f3c80a784967bc319b5c63a9a725b631cd
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Jan 15 13:03:49 2015 +0100

    title case; address rgdal requirement for spTransform

commit e6073767b1e303dcb20c99cfe635d762bdd36eda
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Jan 15 11:51:11 2015 +0100

    update test output

commit 5b36a6916bc8af4cd696bb7742b0e0f03abe5b25
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 14 17:33:25 2015 +0100

    typo...

commit f74c045284b795bc0e4ad1e167608dfa74a21674
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 14 16:59:45 2015 +0100

    update test output

commit 0604dd381b7e2e10f97bbc3d5b26c8119c744a8f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Jan 14 16:41:54 2015 +0100

    prevent @sp attributes getting dropped (lost)

commit a144894fbb8590a701cec4f99ae1f6f09d896916
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Dec 14 13:18:17 2014 +0100

    correct aggregate with args STIDF, STF; add time chk

commit 4c8cd4f1d6220dc43634e4333e18393a7d8d87e9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Nov 22 12:26:03 2014 +0100

    correct bug in stConstruct() when STIDF has non-chronological records

commit 1969b0c7ba6197d96d4541a15a71a84a19291803
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Nov 20 11:26:02 2014 +0100

    vignette pdf

commit 850c3068348815205937350d9dad048ec3e18cfd
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Nov 20 11:22:36 2014 +0100

    update date

commit 2076a4e3b24c5f2aa8e029eca1a28f9d05f39d52
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Nov 20 11:20:35 2014 +0100

    aggregate() for STI and STF with polygons did not work

commit d903c16d831c43ab777a552b7c31687e5046396f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Oct 30 10:55:32 2014 +0100

    move rgeos to Suggests; improve wind plots in vignette

commit da80be7b754e3b613107845166687b02deeb96dc
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Oct 27 19:26:35 2014 +0100

    update the time plots

commit c1f9a7480241deeb177e345332e4045236e9c02e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Oct 27 19:17:24 2014 +0100

    change argument to returnEOFs

commit 1783943b6aa395ee0296bed53e88126b51909fd3
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Oct 27 19:02:58 2014 +0100

    add function eof, deprecate EOF

commit 480f74eb8a74adb4a2508f17d470434c2deabf42
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Oct 16 11:00:32 2014 +0200

    added ... to apply() calls

commit c98b5c3ae85414e1eaf53ea0bf72373d371d0dca
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Oct 16 09:40:00 2014 +0200

    doc omission, found by Roland Harhoff

commit 9c82ea3f06c105323282e486ebae84fc6fcfbaca
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 14 09:25:09 2014 +0200

    name too long: only use first name

commit 0ed91ac92db69dc64cecaa9ecf08efbb2308db45
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Sep 26 21:44:00 2014 +0200

    add parens

commit be2182be7cfafadd2d5ebde3256c7eea902c5e2f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Sep 23 21:59:55 2014 +0200

    add call to match.fun(), add STT method to stplot

commit faab956a4f570502961e2f570b5452a346f540ba
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Sep 11 23:29:30 2014 +0200

    add stplot method for STT

commit d83a3607c80317ace36009534c8a2cf0c276c570
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Sep 7 23:34:13 2014 +0200

    add subset methods with ST objects

commit c974e676d494be7cbab83798763115783704dfee
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Sep 7 23:02:44 2014 +0200

    add selection based on match with STF object

commit 8ad1aa01bcbdc4f12e40f8ffe59a77de8157ff77
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Sep 7 23:02:29 2014 +0200

    tidy tabstop

commit 0db898784310fd8b209a9f586f7da47e2fd83c3b
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Sep 7 22:18:52 2014 +0200

    tidy (revert back to tabstop = 4 spaces)

commit 5a476b1fe7580118aeee8af2cbbb5129716c7dac
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Aug 28 12:36:55 2014 +0200

    tzone attribute is now passed on by rbind.STIDF

commit ac8c4d8bfe3e11ca8f14ade6107b917d7c49bdaa
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Aug 24 14:09:14 2014 +0200

    removed ISO codes from air; version bump; tidy stgvis

commit 901738891468730db87e48490c2fa48fad3cd1ef
Merge: 3b0096f 010b921
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Aug 24 14:05:07 2014 +0200

    Merge pull request #20 from mages/patch-2

    Update stgvis.Rmd

commit 010b921d910fbee90bcc144a0349d7cc20bf88d0
Author: Markus Gesmann <markus.gesmann@gmail.com>
Date:  Sun Aug 24 11:00:48 2014 +0100

    Update stgvis.Rmd

    Changed the order in which the data is loaded, as otherwise the mapping of German state names apears to be overwritten by data in air.

commit 3b0096f5fb43ef2af9a1ad61344c8f7032056cee
Merge: 709d30a c44ea66
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Aug 24 10:35:38 2014 +0200

    Merge pull request #19 from mages/patch-1

    Update stgvis.Rmd

commit c44ea6605becfc38a4c54511a53daf4906b81aa7
Author: Markus Gesmann <markus.gesmann@gmail.com>
Date:  Sat Aug 23 21:05:23 2014 +0100

    Update stgvis.Rmd

    I changed the gvisGeoMap statement to gvisGeoChart, as they don't require Flash. Further the Google geo charts understand that Berlin is not part of Brandenburg. Unfortunately, geo charts don't recognise Brandenburg as a province either, hence the codes become handy again.
    The German state name mapping are available via a CRAN package, thus you don't have to download them from Wikipedia. Finally, I added some number formatting to the option setting.

commit 709d30a7751823aafc6fc77dd9196220edf9ecea
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Aug 22 18:57:22 2014 +0200

    hopefully pass check with r-devel; set TZ in subsetting.R

commit 6226cea3e7f0a758763bb7208f211a032da0221f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Aug 22 15:44:37 2014 +0200

    add pointer to ISO_3166_2_DE in air.rda

commit 2bd0272437f47090ac5fa5ae4616e226bea5158e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Aug 22 15:41:17 2014 +0200

    remove call to wikipedia, add ISO table to air
    add help to stpg to find out whether rgdal misses PostgreSQL driver

commit 7887e760c10ba9a6501ecba1c43410558d12963c
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Aug 22 09:36:48 2014 +0200

    add Irish station means geo chart

commit 11e5da9c96fe9f9dae8d3d93e1b54059af7adbe9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Aug 22 08:20:57 2014 +0200

    add time line graphs

commit ccee6c0164714a022edf6441f41bdc863798c836
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Aug 21 13:48:55 2014 +0200

    update

commit 55709a1d166aaa23834fab036d3af2e08d066fdb
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Aug 21 11:17:20 2014 +0200

    add googleVis example vignette, typo in stsubs

commit f5838cbc73c77ed072a251a4c3b6c1ec56bd5fc0
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Aug 14 13:45:17 2014 +0200

    add library(sp)

commit 542026cafb10400a6bab77d35e2c583783abb2b8
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Jul 13 17:51:32 2014 +0200

    write.tgrass now writes init.txt

commit 59fc45e87113dd5c609b4654f26402bba18b1e8d
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Apr 9 15:42:22 2014 +0200

    update date

commit 7c0ebc61027fea62bcd59898594ea90fdece14f1
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Apr 1 16:08:37 2014 +0200

    include git commit logs in ChangeLog

commit b7f0e46a24e2a0ee81b022709aca83806674a1b0
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Apr 1 16:04:13 2014 +0200

    depend on R 3.0.0, mv old ChangeLog

commit f8d07fd645fbe53f03d77a12113f186f7acd4e99
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Mar 27 20:30:44 2014 +0100

    tidy indentation and obsolete braces

commit 89827b7864688b94cd8edd87312bc8d0b9004e9e
Merge: 9023c72 2eca08d
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Mar 25 11:35:11 2014 +0100

    Merge pull request #18 from BenGraeler/master

    special case of one row matrices for subsetting

commit 2eca08d29e11a5b01fb489104779bbfb679a23c6
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Mar 25 11:30:10 2014 +0100

    - handeled the special case of one row matrices for subsetting

commit 9023c7262bd12901afa4a6af3941114756726a4a
Merge: d361d74 12b506f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Mar 14 10:41:06 2014 +0100

    Merge pull request #17 from BenGraeler/master

    Unified subsetting of ST* objects

commit 12b506fdc67f98c96fcb837728a39b1dcb6542a0
Merge: b0c4e1e c1bf9cf
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Thu Feb 27 14:13:46 2014 +0100

    - some textual changes

    Merge branch 'master' of https://github.com/BenGraeler/spacetime

    Conflicts:
    vignettes/stsubs.Rnw
    vignettes/stsubs.pdf

commit b0c4e1ef23e1c8bb0dc155bb145f45f627159142
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Thu Feb 27 11:52:57 2014 +0100

    - some textual changes in stsubs.Rnw
    - updated test files for subsetting

commit c1bf9cf851f321c674ab5b1f8283d7143287582a
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Thu Feb 27 11:52:57 2014 +0100

    - some textual changes in stsubs.Rnw

commit 9add4fb1220bff4cf5af7c292cc0314619be3bf7
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Wed Feb 26 16:52:22 2014 +0100

    - added vignette on subsetting of spacetime classes
    - some corrections of the subsetting methods along the way of the vignette

commit cdf6e5655c09843db5026301ffde4f1d79c229b8
Merge: 0acbe05 d361d74
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Wed Feb 26 14:13:54 2014 +0100

    Merge remote-tracking branch 'edzerRepo/master'

commit d361d74a72065ee1579d1e16cee65954b126047b
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Feb 26 12:20:28 2014 +0100

    move trajectories code into a separate package

commit 0acbe05cf884775d2fa40eab2846d4af70856414
Merge: 8ef17f0 8283e44
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Feb 25 16:21:23 2014 +0100

    Merge remote-tracking branch 'edzerRepo/master'

commit 8ef17f0a5f733c6eab7027b15db2055a3e6ba85a
Merge: 2fd98e6 47d350d
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Feb 25 16:18:44 2014 +0100

    Merge remote-tracking branch 'edzerRepo/master'

commit 2fd98e68c2c369421179aa8d16fd27accb8b7b55
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Feb 25 16:02:29 2014 +0100

    - STI.. allows now for multiple selection

commit 559e662ce45567fd8e34f8a5a370f777c60df4a9
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Feb 25 15:36:50 2014 +0100

    - STF.. now allows for a matrix index, but returns STS..

commit 9c18d8ba936e0aebc6215a45c789ebcea6d86d6f
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Tue Feb 25 13:50:12 2014 +0100

    - allow for multiple selection in STS..
    - respect ordered subsetting from STS..

commit 8283e44958909bb35d398b6d535bc0eb41180e04
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Feb 18 19:00:08 2014 +0100

    add url of geolife

commit fd1005cd70ad57e9583d4e3bbd2623711133c79a
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Feb 18 18:48:10 2014 +0100

    add geolife reading demo (without geolife data)

commit 259cbef2526120cac4bc8f7a9bf9fc1284e6d3a5
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Feb 17 08:59:04 2014 +0100

    clean, tidy

commit 7cb6f6a7eae301e2154b116d4b3bbeecea4adfd9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 16 22:59:49 2014 +0100

    avoid rgl plot from vignette

commit 8b680daebbdccdd3cf5ddf6fdac44c8f35c3dfbf
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 16 21:50:06 2014 +0100

    add subsetting output

commit 1a6cebfc8c0115e5efe2f58098fb5aa607ee9fa3
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 16 21:49:40 2014 +0100

    clean up tests

commit a8c7cda2b16218beeb4090c03d6c0c9cdb2ec8bd
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 16 18:48:44 2014 +0100

    add A3 example, add subsetting test

commit 785a40cad6e5f16fd0d8223ebe03d06af21b66f0
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 16 17:29:56 2014 +0100

    clean tracks vignette dependencies

commit 47d350d50204d6c8c0ec1cf1b701846a79ef6603
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Feb 14 17:00:14 2014 +0100

    remove more dependencies

commit 850c3b522b7856d8bf505b80747763a40b82dded
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Feb 14 16:52:36 2014 +0100

    remove dependencies in tracks.Rmd

commit 14d91e6b3e7490cb715a75d1c6322775cbbcfe83
Merge: 09f8268 67d2dfb
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Feb 14 15:44:50 2014 +0100

    Merge branch 'master' of github.com:edzer/spacetime

commit 09f82681a343f44b8bdcc46532077c56271bb569
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Feb 14 15:44:03 2014 +0100

    make tracks vignette work without https, add A3

commit 67d2dfbfac10f521f65cb3265a8f995a19928b9a
Merge: 196edcd a7e997f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Feb 9 10:09:49 2014 +0100

    Merge pull request #16 from BenGraeler/master

    matrix like subsetting for STS and STSDF

commit a7e997fe73ce166f04cd700a9937a36352b9c673
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Thu Feb 6 13:08:56 2014 +0100

    - ignore issues

commit 196edcd5476f2d76fc5642dbe787158d4adfb782
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Jan 25 20:30:35 2014 +0100

    optimize coercion from STIDF to STSDF

commit 85cf72d367fe61f2e5c755cc52b337a3eac5d250
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Jan 20 08:25:39 2014 +0100

    update output

commit 8b580e1fa6d3ea4ba050d9b6d73f599b7918de7a
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Jan 19 23:17:30 2014 +0100

    merge pull request; simplify vignette requirements

commit 678e7a71494724849eb7e6e9100354f0abcb08bb
Merge: fe81b0d 9ed6d1c
Author: Bene Luks <benedikt.klus@mail.de>
Date:  Sun Jan 19 22:31:10 2014 +0100

    Merge remote-tracking branch 'upstream/master'

commit fe81b0d58e459e2b350a465d5fdb83a9f4c715d1
Author: Bene Luks <benedikt.klus@mail.de>
Date:  Sun Jan 19 22:30:42 2014 +0100

    Make R CMD build happy on Windows systems.

commit 18280f3ce920c93d9e3cacda2b6e7c1671e9139b
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Wed Jan 8 17:57:49 2014 +0100

    - supports matrix index for sub-setting

commit 1b8588bb24f9437fd724bebc026d80f1f8ce38ea
Merge: 3335b43 9ed6d1c
Author: Benedikt Gr辰ler <ben.graeler@uni-muenster.de>
Date:  Tue Jan 7 23:34:15 2014 -0800

    Merge pull request #2 from edzer/master

    update to edzer/spacetime

commit 9ed6d1c12a462d1021eb9fc9751f731e04f53369
Merge: f2306e2 84da479
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Dec 19 06:01:28 2013 -0800

    Merge pull request #14 from k2sk8s/master

    Added vignette to summarise recent trajectory work

commit 84da479fb6d42e8edf0c58d676777b485561a05c
Author: Bene Luks <benedikt.klus@mail.de>
Date:  Thu Dec 19 10:42:47 2013 +0100

    Added vignette to summarise recent trajectory work.

commit 8ed3561be1e245f06ae47d87d15ad2fb50edde85
Author: Bene Luks <benedikt.klus@mail.de>
Date:  Thu Dec 19 10:41:14 2013 +0100

    Fill missing attribute data with NA instead of dropping the whole column.

commit f2306e215c3d3539f3b4d1dda6413288ba7b735b
Merge: afcf4db 6bd22a6
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Nov 27 14:42:29 2013 +0100

    Merge branch 'master' of github.com:edzer/spacetime

commit afcf4db3c0c52e453028551ffddaec428a3c2c7e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Nov 27 14:41:30 2013 +0100

    normalize function for cyclic time (hour, weekday)

commit 6bd22a6d57f6703b6b0bf2aa0ddb7b6cb8b12226
Merge: e534d16 dc56ad4
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Nov 26 13:15:36 2013 -0800

    Merge pull request #13 from k2sk8s/master

    Fix: Make aspect ratio work for non lat/lon data

commit dc56ad43a969624154626c415d829f0c777065f8
Merge: fa19c87 e534d16
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Nov 26 22:11:00 2013 +0100

    Merge remote-tracking branch 'upstream/master'

commit fa19c87665450a438700823148de103e4980c9b1
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Nov 26 22:10:24 2013 +0100

    Fix: Make aspect ratio work for non lat/lon data.

commit e534d16280e2314ff15cedf98a86096b6e1a446d
Merge: e05dfa5 29ed800
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Nov 26 08:20:30 2013 -0800

    Merge pull request #12 from k2sk8s/master

    Updated stcube methods to use a sensible aspect ratio and normalized tim...

commit 29ed800be8a45275418d56709c4bf52d08b3c962
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Nov 26 16:19:55 2013 +0100

    Updated stcube methods to use a sensible aspect ratio and normalized time values.

commit e05dfa5ca8452575ca7588dc4c6a0b2c3415ff55
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Nov 23 00:25:07 2013 +0100

    add stcube demo, merge Benedikt Klus' stcube work

    moved rgl and OpenStreetMap to Suggests:

commit 326c165fddbfe149d47feb2543615cc1fba4ff0d
Merge: 33dd041 481a575
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Nov 23 00:24:26 2013 +0100

    Merge branch 'master' of https://github.com/k2sk8s/spacetime

    Conflicts:
    DESCRIPTION

commit 33dd0414067c56e6d04c29fc3688c8114a0a9cd9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Nov 22 23:59:27 2013 +0100

    update Suggests: list

commit 481a5753cccc4f2ed5fa290125b0b69f2d26948e
Author: Bene Luks <b.luks@gmx.de>
Date:  Fri Nov 22 22:04:44 2013 +0100

    Added stcube methods.

commit 3335b43065e878107063160da93082e35b830c95
Merge: 5a1e1c4 8deb983
Author: Benedikt Gr辰ler <ben.graeler@uni-muenster.de>
Date:  Tue Nov 19 01:32:11 2013 -0800

    Merge pull request #1 from edzer/master

    pull from Edzer

commit 8deb98368d305ebe606d2cc0b341ed834d77152f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Nov 18 11:42:51 2013 +0100

    update date

commit 9bb8904ee6619c5c6ae1a500d719b6d5ebe68b75
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Nov 15 15:05:35 2013 +0100

    add example, refresh example test output

commit cca40266a461bcb5a5afd9d3ed3d65142d334f53
Author: Bene Luks <b.luks@gmx.de>
Date:  Fri Nov 15 00:50:10 2013 +0100

    Updated selection methods.

commit 46819c20bd76991689abc65b2038f09366891c21
Merge: f3ef5c6 5d69399
Author: Bene Luks <b.luks@gmx.de>
Date:  Thu Nov 14 22:48:24 2013 +0100

    Merge remote-tracking branch 'upstream/master'

commit f3ef5c693dd8c145823c181501e779059733eaca
Author: Bene Luks <b.luks@gmx.de>
Date:  Thu Nov 14 22:48:05 2013 +0100

    Added [[, [[<-, $ and $<- methods.

commit 5d69399de5e334d9eb64578e14bd8a875bc6cfb9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Nov 14 13:17:01 2013 +0100

    improve NA time warning

commit 09142041049dccdacc773f76d20b6f28995a4c54
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Nov 13 16:36:09 2013 +0100

    Simplified code.

commit 92e5eff84aa0663961665d0e6b3a7350d7a06ee5
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Nov 13 16:26:04 2013 +0100

    generalize() now correctly checks the number of passed arguments. Added documentation. Fixed indentation.

commit 5f31c3f72610a891a4c068ee34d52bc851950199
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sat Nov 9 20:59:47 2013 +0100

    update author list; tidy generalize

commit 5a1e1c46fa5bf458f4bb831cc189c0cf16fdaebb
Author: Benedikt Gr辰ler <ben.graeler@gmail.com>
Date:  Fri Nov 8 09:24:39 2013 +0100

    - STSDF is now plotted with plot.STSDF
    - added coercion to STIDF for the call of stplot with STSDF

commit 7ffeecb36ff614a0e55ba71f501ce139f8e3aefc
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Nov 8 00:18:59 2013 +0100

    simplify generalize, pass ... to FUN, update man

commit 4ca559402f47c87bea7fda340b399df4c2800010
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Nov 6 20:30:08 2013 +0100

    added coerce to Spatial, changed dim names

commit 2157dab93e358fed7ecd43c5909beee4d91016c4
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Nov 5 22:36:37 2013 +0100

    Updated generalize method to consider all segments for aggregation.

commit afe4626fe82797957a10bf8a062b9e6d04d57bc7
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 29 00:26:04 2013 +0100

    Added 'toPoints' argument.

commit 7452d39fc447035b08ebfa40515d5120759298ef
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 28 23:25:51 2013 +0100

    Updated 'generalize' methods to allow for simplifying the given geometry.

commit 2666d7a3a9237b314cfe334c65da18ba0c8e074c
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 28 21:35:10 2013 +0100

    Updated signature of 'generalize' methods to improve code maintainability. Added further regression tests.

commit 3dc5dd2c333400067e1987422021777eab92b774
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 28 20:18:58 2013 +0100

    Updated 'generalize' methods to allow for generalizations over a predefined segment length.

commit 454f7c9df13bb0ba656edf28dff928cc1dfdc7f4
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 28 19:53:38 2013 +0100

    Updated 'generalize' methods to allow for generalizations over distance.

commit 7e4b418e8974b160fd03236ff2718bfb83e61f96
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 28 12:54:54 2013 +0100

    Added more 'generalize' methods. Added documentation to make 'R CMD check' run clean. Added regression tests.

commit c28edf0d697eb66487960672445846e529687571
Author: Bene Luks <b.luks@gmx.de>
Date:  Sun Oct 27 21:39:59 2013 +0100

    Added generalize method.

commit 3cc6f9bcbb53f5f70462571c9b6bb5e4d1e33189
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Oct 27 00:14:35 2013 +0200

    add stbox method, set back bbox, correct aggregate

    stbox methods now give the space and time ranges as a
    data.frame; bbox gives the sp-compatible spatial range matrix.

    aggregate with only a Spatial argument can do aggregation
    over all time, or spatial aggregation by time. STF and STF
    do it default per time slice (as in the sto vignette), other
    classes will group all, within a spatial feature, over time.

commit 8e647893f255b5619ab27062abe0f84182f21265
Merge: 01955e2 8676eb6
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 17:50:47 2013 +0200

    Merge branch 'master' of github.com:edzer/spacetime

commit 01955e29715196ed3d27466f2d0a8821ce732f1e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 17:48:02 2013 +0200

    aggregation ST by Spatial now aggregates over time

    aggregation used to be by time slice too, making it only
    useful for STFDF objects, and actually doing an aggregate(ST,ST)
    where the second has identical time resolution as the first.

    The old behaviour is retained by
    aggregate(STFDF, Spatial, keepTime = TRUE)
    which is NOT the default, now (so I need to adapt sto.Rnw too).

commit 8676eb60a7a3a375d36ce34ab35a651c14a6ade9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 15:12:12 2013 +0200

    Update contribute.md

commit 4377bf807ea214cb11a57321fd64efcf49134b90
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 15:11:15 2013 +0200

    Update contribute.md

commit 83e143f9e5ee00f5f832b67c95636682592eb8e0
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 15:10:11 2013 +0200

    Update contribute.md

commit 4ab6932b640a3105f571cef5adf7f7be97301063
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 14:47:44 2013 +0200

    Update contribute.md

commit e8d806ce929736b49677b2d07ce5bf3e8570f380
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 14:43:19 2013 +0200

    Update contribute.md

commit 5d884324b54a633e6c828a8138dd1bc2ab4b7f91
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 14:24:24 2013 +0200

    add contribute file, and .Rbuildignore

commit 3519ba44ed62877d90e73565b7773c444ad66c2f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 25 13:47:39 2013 +0200

    coerce SpatialGrid into SpatialPixels in aggregate

commit bb06885306275037bb1b7af9b9e8296c1e4afb9f
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Oct 23 00:28:57 2013 +0200

    update date and role

commit 6a14c1f2073c674873a08125ad5a4568dec13e16
Merge: b81353c 423c6aa
Author: edzer <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 22 08:01:02 2013 -0700

    Merge pull request #5 from k2sk8s/master

    Added aggregate and coordinates methods

    Note that when coercing to SpatialPointsDataFrame, aggregate methods will not know how to deal with time (temporal aggregation, or spatio-temporal aggregation).

commit 423c6aa18caf55f2470ab7d31f42a2e2d7c85d42
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 22 14:43:58 2013 +0200

    Added coordinates methods.

commit 2bfa55bccce4aa28ec455c3a37e01e0d265bedaf
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 22 12:38:49 2013 +0200

    Added aggregate methods.

commit b81353ce09536de61d7406ea7be4efa53cb6f327
Merge: 0a09988 bdfa19c
Author: edzer <edzer.pebesma@uni-muenster.de>
Date:  Mon Oct 21 06:08:27 2013 -0700

    Merge pull request #4 from k2sk8s/master

    Added summary methods.

commit bdfa19c34d61cae88af7981dc3d5ebc9c18bb035
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 21 14:40:53 2013 +0200

    Added summary methods.

commit 0a09988dde5d695eb0b465c3414181aae7d7a6da
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Oct 17 07:56:10 2013 +0200

    fix random seed to obtain constant output from test

commit 2448f15bac06db0f0c08840c5eb4b7b4244e30b4
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Oct 16 23:58:22 2013 +0200

    add tracks test output

    copied from spacetime.Rcheck/tests, this file contains the
    reference test output (and should, after checking, be replaced
    again when the tests are changed or extended)

commit 2f880211cbc00eaec98ea027577b54d247b3a204
Merge: 37905ec cd2011e
Author: edzer <edzer.pebesma@uni-muenster.de>
Date:  Wed Oct 16 14:38:31 2013 -0700

    Merge pull request #3 from k2sk8s/master

    Added first regression tests, among others

commit cd2011e9d78acf6d3e59bfbe79c6f02ec200c068
Merge: dedfce8 37905ec
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 16 22:14:07 2013 +0200

    Merged upstream. Resolved merge conflicts.

commit dedfce84ccf66b03a8576c8e85223abc0708b9d1
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 16 21:10:58 2013 +0200

    Added first regression tests. More to come.

commit 3d4deec02ab61e0e7dadf27c9b66767384a0a7d6
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 16 21:01:16 2013 +0200

    Fixed selection bug. Added comments.

commit 4065f03a809006734214597d306cbe93f4d367d3
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 16 16:18:19 2013 +0200

    Wrapped comments at 80 characters.

commit 8e1628d4358eb718872021e1af85119bd806418c
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 16 16:08:57 2013 +0200

    Removed redundant coercion method. Wrapped comments at 80 characters.

commit 37905ecf63c55ec46607b2c9c3ccbd4ce3550a7a
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 15 19:00:07 2013 +0200

    add rbind for STIDF, sp dependency on rev 1478

    created dependency on sp revision 1478 (r-forge)
    that cleans up the CRS checking in validity functions of
    Tracks and TracksCollection. Removed the ::: dependencies.
    added an alias to over.Rd, to make R CMD check clean.

commit a249142559134940ce878e2bf98cb79afbc21d80
Merge: 0b35b47 0ef1509
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 15 16:01:37 2013 +0200

    Merge branch 'master' of https://github.com/k2sk8s/spacetime

commit d7b13507d9e5f98d10d3d32f746c230f1919bd08
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 15:43:11 2013 +0200

    Removed redundant coercion method.

commit 4b1c8ec6b87c57e6e10e51fd9fb6a859f69bdd0d
Merge: 0ef1509 0b35b47
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 14:18:49 2013 +0200

    Merge remote-tracking branch 'upstream/master'

commit 0ef1509941d09ae2a4d88d47b19ceadac9d8322e
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 14:00:15 2013 +0200

    Added coercion methods to allow for converting trajectories to SpatialPointsDataFrame.

commit 2e27ba0b23d19db0ccc837f8e58ed3673fc3f05b
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 13:40:25 2013 +0200

    Added coercion methods to allow for converting trajectories to spatio-temporal points.

commit bccfa1d231ac2239d534e28639229d7e3f2cee7a
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 12:49:20 2013 +0200

    Added coercion methods to allow for converting trajectories to time series. Code cleanups.

commit 38e5d8c263d809819044eb6ec9fe0ff9ef2996df
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 11:09:19 2013 +0200

    Added over method for Track objects. Fixed coercion method.

commit 74112f86fec196f294e7f57a637acbf0cf88592e
Author: Bene Luks <b.luks@gmx.de>
Date:  Tue Oct 15 10:45:42 2013 +0200

    Added rgeos as a required dependency to make any over methods for trajectory classes work flawlessly.

commit 0b35b472cc0d9bb09cdcca31b5119f9bf7ab18ae
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 15 09:46:55 2013 +0200

    update minor version, date, URL, contributor

commit a32e458c4891247a2c711a729f53b662ae843da2
Author: Bene Luks <b.luks@gmx.de>
Date:  Mon Oct 14 16:39:33 2013 +0200

    Fixed selection method to correctly address selections such as Tr[list(integer(0), 2)]. Code cleanups.

commit 5f1a147b355593a1e3eb36231c1e46d852e1579e
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Oct 13 18:56:15 2013 +0200

    clean up for R CMD check

commit c41946be5ec4687700929ce5a94569db4edd212a
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Sun Oct 13 18:27:11 2013 +0200

    added c, stack and unstack methods, and example code

commit ef16d17c182c911f9e8e5be2ac0b2723fe09d840
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 11 23:02:49 2013 +0200

    R CMD check is clean again

commit aa097ed255fb4b238f323cfd2d33cbcf4f8ad6fc
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 11 17:18:22 2013 +0200

    added proj4string and coerce to SpatialLines* methods

commit fbb085878bf68cffcba0dbe7166b70028aae0040
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Oct 10 12:06:38 2013 +0200

    tested list selection; updated over signatures.

commit e2c4b284f17de55dd4ebfd74ab0ea3360458f483
Author: Bene Luks <b.luks@gmx.de>
Date:  Wed Oct 9 20:29:32 2013 +0200

    Added coercion methods. Arbitrary selection of ID/Track combinations are now possible.

commit 3e145a0e9d93e7a70a539a46b439df572a114e30
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Oct 4 14:42:43 2013 +0200

    corrected plot x/ylim values, added default names

commit 1be33fdbed6560773c79f376cdbb37e72fab3620
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Oct 2 16:45:04 2013 +0200

    added Track IDs; corrected direction calculations

commit 7988d6db57a42a0970668e4a9c95ccc4a5aa7d22
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Tue Oct 1 19:57:57 2013 +0200

    added sp.layout to spplot for TracksCollection

commit 109b44134f74dddcd19814b57ac92cb6ea8404c5
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Mon Sep 30 23:35:09 2013 +0200

    added segments class; added simple [ selection methods

commit 4f142a943853cf29792cc3c0c9b8730e3d616b02
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Sep 27 18:00:32 2013 +0200

    added dim methods, improved stplot.

commit 7c490847192267ab1d87c4b1c5358361efc2b8b9
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Fri Sep 27 16:49:23 2013 +0200

    plotting trajectories, both stplot and plot; example in doc.

commit 20a55bb3d49442e1d623cc74906a28617a4b79ad
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Sep 26 23:16:46 2013 +0200

    more stplot work for TracksCollection objects, xx2seg conversions

commit 2b8b7346691799c8ca7fe10d2233719cce1762d1
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Sep 26 17:34:53 2013 +0200

    more on trajectories; some plotting fn

commit 3bbfc938653b676a2c965addc3de1ec769034932
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Thu Sep 26 16:11:07 2013 +0200

    trajectory work

commit b4ebdaeb9b351a5dd974f482a35d06660d782607
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 20:58:26 2013 +0200

    work on Tracks

commit 1e1c9260af2f508d5fe15f1732ad84b5b928faaf
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 18:03:12 2013 +0200

    removed svn;  added Tracks files

commit bb3fc2124386914751e3bf84ab570948cc9ba889
Author: edzer <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 17:20:51 2013 +0200

    added urls

commit b642fddf8c720b51784d2b6c1d16fc156f634696
Merge: 7d8ee87 95e1e2a
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 17:11:43 2013 +0200

    Merge github.com:edzer/spacetime

commit 7d8ee87af202e98a80665798df930188fb187bf1
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 16:04:57 2013 +0200

    initial commit

commit eba0f2d720ce7053d97a728fe1b7844a8f25874d
Author: Edzer Pebesma <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 16:03:17 2013 +0200

    first commit

commit 95e1e2aa46c55d7dfead687f93877b1d62d939bb
Author: edzer <edzer.pebesma@uni-muenster.de>
Date:  Wed Sep 25 07:02:03 2013 -0700

    Initial commit
2013-09-20 15:47  ben_graeler

* spacetime/R/STSDF-methods.R: - fixed minor issue for single
  points in space and time in coordinates method

2013-09-20 12:34  edzer

* spacetime/R/STFDF-methods.R, spacetime/R/STIDF-methods.R,
  spacetime/R/STSDF-methods.R: added [ methods for STF, STS, STI;
  needs some testing

2013-09-19 09:33  jinlong

* trajectories/R/aggregate.R, trajectories/R/crop.R,
  trajectories/data/geolife_sample.RData,
  trajectories/inst/geolife_reader.R,
  trajectories/man/geolife_sample.Rd,
  trajectories/vignettes/demo.Rmd: - Revised crop();
  - Revised aggregate();
  - Updated geolife_sample.RData
  - Added demo.Rmd

2013-09-18 06:53  jinlong

* trajectories/R/summary.R, trajectories/data/geolife_sample.RData,
  trajectories/inst/geolife_reader.R,
  trajectories/man/geolife_sample.Rd,
  trajectories/tests/crop_and_plot_demo.R,
  trajectories/tests/crop_demo.Rout.save: - summary() function
  updated
  - geolife_reader.R updated with the computation of trajectory
  stats
  - geolife_sample dataset updated

2013-09-16 07:50  edzer

* trajectories/R/crop.R,
  trajectories/tests/aggregate_demo.Rout.save: take right
  coordinates

2013-09-16 07:46  edzer

* trajectories/R/crop.R: right coordinates

2013-09-16 07:40  edzer

* trajectories/tests/STItoSTTDFdemo2.Rout.save: test output

2013-09-16 06:59  jinlong

* trajectories/tests/crop_and_plot_demo.R: - updated the data for
  demo

2013-09-16 05:41  jinlong

* trajectories/data/geolife_sample.RData,
  trajectories/inst/geolife_reader.R,
  trajectories/man/geolife_sample.Rd,
  trajectories/tests/crop_and_plot_demo.R,
  trajectories/tests/crop_and_plot_demo.Rout.save,
  trajectories/tests/geolife_reader.R, trajectories/vignettes,
  trajectories/vignettes/sttdf.png,
  trajectories/vignettes/sttdf_cropped_w_pol.png,
  trajectories/vignettes/sttdf_w_pol.png: - geolife sample dataset
  added.

2013-09-16 05:07  jinlong

* trajectories/NAMESPACE, trajectories/R/STItoSTTDF.R,
  trajectories/R/crop.R, trajectories/notes,
  trajectories/tests/STItoSTTDFdemo.R,
  trajectories/tests/STItoSTTDFdemo2.R,
  trajectories/tests/STItoSTTDFdemo2.Rout.save,
  trajectories/tests/STTDF_selection.R,
  trajectories/tests/aggregate_demo.R,
  trajectories/tests/aggregate_demo.Rout.save,
  trajectories/tests/crop_and_plot_demo.R,
  trajectories/tests/crop_and_plot_demo.Rout.save,
  trajectories/tests/crop_demo.R,
  trajectories/tests/crop_demo.Rout.save,
  trajectories/tests/cut.STTDF.SpatialPolygons.R,
  trajectories/tests/geolife_reader.R,
  trajectories/tests/over.STTDF.SpatialPolygons.R,
  trajectories/tests/read.R,
  trajectories/tests/summary_and_plot_demo.R,
  trajectories/tests/traj_sample.R,
  trajectories/tests/traj_stats.R: - output files added
  - tests files corrected
  - bug fixed in crop
  - geolife_reader.R revised
  - directory cleaned

2013-09-11 10:58  edzer

* spacetime/DESCRIPTION: version bump

2013-09-10 13:55  edzer

* spacetime/NAMESPACE, spacetime/R/ST-methods.R,
  spacetime/R/coerce.R: setMethod geometry
  export geometry and aggregate
  corrected coerce STIDF->STTDF

2013-09-09 08:37  edzer

* spacetime/vignettes/stpg.Rnw: back to 2.14.x compatibility

2013-09-06 07:41  edzer

* trajectories/NAMESPACE: exportMethod plot

2013-09-06 07:27  edzer

* trajectories/tests/STItoSTTDFdemo.Rout.save: redid test output

2013-09-06 07:24  edzer

* trajectories/tests/STItoSTTDFdemo.R: fixed random number
  generator seed

2013-09-06 07:22  edzer

* spacetime/DESCRIPTION,
  trajectories/tests/STItoSTTDFdemo.Rout.save: added test output

2013-09-06 07:17  edzer

* trajectories/tests/STItoSTTDFdemo.R,
  trajectories/tests/crop_demo.R: added libraries

2013-09-06 07:12  edzer

* trajectories/test, trajectories/tests: directory name change

2013-09-06 06:59  edzer

* trajectories/man/summary.Rd: addressed the NOTE by R CMD check

2013-09-06 06:49  jinlong

* trajectories/R/aggregate.R,
  trajectories/test/merge_not_working.R,
  trajectories/test/sample_not_working.R: - Fix bug in aggregate.R

2013-09-05 09:28  edzer

* spacetime/DESCRIPTION, spacetime/R/Class-ST.R,
  spacetime/R/Class-STFDF.R, spacetime/R/Class-STIDF.R,
  spacetime/R/Class-STSDF.R, spacetime/R/Class-STTDF.R: removed
  slots = c(...) notation, to keep R 2.14 compatibility.

2013-09-03 09:50  edzer

* spacetime/DESCRIPTION: version downgrade

2013-09-03 09:44  edzer

* spacetime/DESCRIPTION, spacetime/man/eof.Rd,
  spacetime/man/stinteraction.Rd,
  spacetime/tests/Examples/spacetime-Ex.Rout.save: issues caused by
  gstat 1.0-17

2013-09-03 07:19  jinlong

* trajectories/NAMESPACE, trajectories/R/aggregate.R,
  trajectories/R/crop.R,
  trajectories/R/cut.STTDF.SpatialPolygons.R,
  trajectories/man/aggregate.Rd,
  trajectories/man/cut.STTDF.SpatialPolygons.Rd,
  trajectories/test/aggregate_demo.R,
  trajectories/test/crop_demo.R,
  trajectories/test/summary_and_plot_demo.R: - Add aggregate()
  function;
  - Rewrite crop() function;
  - Delete cut.STTDF.SpatialPolygons() function;
  - Modify the demo for aggregate(), summary(), plot(), and crop()

2013-09-02 13:06  edzer

* spacetime/.Rbuildignore, spacetime/DESCRIPTION,
  spacetime/NAMESPACE, spacetime/R/aggregate.R,
  spacetime/man/ST-class.Rd, spacetime/man/STFDF-class.Rd,
  spacetime/man/STSDF-class.Rd, spacetime/man/STTDF-class.Rd,
  spacetime/man/fires.Rd, spacetime/man/na.Rd,
  spacetime/man/over.Rd, spacetime/man/unstack.Rd,
  spacetime/tests/Examples/spacetime-Ex.Rout.save,
  spacetime/tests/basic.R, spacetime/tests/basic.Rout.save,
  spacetime/tests/over.R, spacetime/tests/over.Rout.save,
  spacetime/tests/rw.R, spacetime/tests/stconstruct.R,
  spacetime/tests/stconstruct.Rout.save,
  spacetime/tests/traj.Rout.save, spacetime/tests/wind.R,
  spacetime/tests/wind.Rout.save, spacetime/vignettes/jss816.Rnw,
  spacetime/vignettes/sto.Rnw: sp is now imported, not loaded;
  adjusted all examples and demos.

2013-08-30 19:46  edzer

* spacetime/DESCRIPTION: addressed CRAN NOTE: removed duplicates
  between Suggests: and Imports:

2013-08-13 06:07  jinlong

* trajectories/NAMESPACE, trajectories/R/crop.R,
  trajectories/R/over.STTDF.STTDF.R,
  trajectories/R/over.STTDF.SpatialPolygons.R,
  trajectories/R/plot.R, trajectories/R/summary.R,
  trajectories/man/crop.Rd, trajectories/man/over.STTDF.STTDF.Rd,
  trajectories/man/over.STTDF.SpatialPolygons.Rd,
  trajectories/notes, trajectories/test/crop_demo.R,
  trajectories/test/read.R,
  trajectories/test/summary_and_plot_demo.R: - crop() added
  - summary() fixed with invalid data attributes

2013-08-05 07:40  jinlong

* trajectories/demo/00Index, trajectories/demo/STItoSTTDFdemo.R,
  trajectories/demo/STItoSTTDFdemo2.R,
  trajectories/demo/STTDF_selection.R,
  trajectories/demo/cut.STTDF.SpatialPolygons.R,
  trajectories/demo/geolife_reader.R,
  trajectories/demo/over.STTDF.SpatialPolygons.R,
  trajectories/demo/read.R, trajectories/demo/traj_sample.R,
  trajectories/demo/traj_stats.R, trajectories/notes,
  trajectories/test, trajectories/test/STItoSTTDFdemo.R,
  trajectories/test/STItoSTTDFdemo2.R,
  trajectories/test/STTDF_selection.R,
  trajectories/test/cut.STTDF.SpatialPolygons.R,
  trajectories/test/geolife_reader.R,
  trajectories/test/over.STTDF.SpatialPolygons.R,
  trajectories/test/read.R, trajectories/test/traj_sample.R,
  trajectories/test/traj_stats.R: - Move all files in demo folder
  into test folder;
  - Update the note;

2013-08-05 07:11  jinlong

* trajectories/R/STItoSpatialLines.R, trajectories/R/plot.R,
  trajectories/R/summary.R, trajectories/man/STItoSpatialLines.Rd,
  trajectories/man/plot.Rd, trajectories/man/summary.Rd: - Missing
  files added

2013-08-05 07:11  jinlong

* trajectories/NAMESPACE,
  trajectories/R/cut.STTDF.SpatialPolygons.R, trajectories/notes: -
  Added plot.R, summary.R, STItoSpatialLines.R
  - Modified cut.STTDF.SpatialPolygons.R and STI to SpatialLines.R

2013-07-23 13:10  edzer

* trajectories/man/traj_sample.Rd: alias

2013-07-23 12:55  jinlong

* trajectories/DESCRIPTION, trajectories/NAMESPACE,
  trajectories/R/STItoSTTDF.R,
  trajectories/R/STTDFtoSpatialLines.R,
  trajectories/R/cut.STTDF.SpatialPolygons.R,
  trajectories/R/over.STTDF.SpatialPolygons.R,
  trajectories/demo/00Index, trajectories/demo/STItoSTTDFdemo2.R,
  trajectories/demo/cut.STTDF.SpatialPolygons.R,
  trajectories/demo/traj_sample.R,
  trajectories/man/STTDFtoSpatialLines.Rd,
  trajectories/man/cut.STTDF.SpatialPolygons.Rd,
  trajectories/man/over.STTDF.SpatialPolygons.Rd: -
  cut.STTDF.SpatialPolygons.R added
  - STTDFtoSpatialLines.R added

2013-07-21 16:22  jinlong

* trajectories/NAMESPACE,
  trajectories/R/over.STTDF.SpatialPolygons.R, trajectories/data,
  trajectories/data/traj_sample.RData, trajectories/demo/00Index,
  trajectories/demo/over.STTDF.SpatialPolygons.R,
  trajectories/demo/traj_sample.R,
  trajectories/man/over.STTDF.STTDF.Rd,
  trajectories/man/over.STTDF.SpatialPolygons.Rd,
  trajectories/man/traj_sample.Rd, trajectories/notes: - New
  dataset
  - over.STTDF.SpatialPolygons

2013-07-16 06:54  jinlong

* trajectories/DESCRIPTION, trajectories/NAMESPACE,
  trajectories/R/STItoSTTDF.R, trajectories/R/over.STTDF.STTDF.R,
  trajectories/demo/STItoSTTDFdemo.R,
  trajectories/demo/geolife_reader.R, trajectories/inst,
  trajectories/man/over.STTDF.STTDF.Rd, trajectories/notes: -
  over.STTDF.STTDF.R added

2013-07-14 07:26  jinlong

* trajectories/NAMESPACE, trajectories/demo/STTDF_selection.R: -
  Clean package check with one warning message

2013-07-13 11:54  edzer

* spacetime/vignettes/stpg.Rnw: set eval=FALSE again; updated the
  off-cran eval=TRUE document

2013-07-13 09:18  edzer

* spacetime/vignettes/stpg.Rnw: updated vignette

2013-07-13 07:58  jinlong

* trajectories/demo/00Index, trajectories/demo/STItoSTTDFdemo.R,
  trajectories/demo/sttdf_computation.R,
  trajectories/man/STItoSTTDF.Rd: - Updated the description in
  demo/00Index
  - Added comments in STItoSTTDFdemo.R

2013-07-12 09:19  edzer

* trajectories/DESCRIPTION, trajectories/NAMESPACE,
  trajectories/demo/00Index, trajectories/man/STItoSTTDF.Rd: tidy
  to make check clean; import rgdal to support project().

2013-07-12 07:56  jinlong

* trajectories/DESCRIPTION, trajectories/NAMESPACE,
  trajectories/R/STItoSTTDF.R, trajectories/man/STItoSTTDF.Rd: -
  Updated STItoSTTDF.Rd

2013-07-12 07:23  jinlong

* trajectories/DESCRIPTION, trajectories/NAMESPACE,
  trajectories/R/STItoSTTDF.R, trajectories/man/STItoSTTDF.Rd: -
  Fixed multiple bugs that preventing building the package

2013-07-11 06:23  jinlong

* trajectories/NAMESPACE, trajectories/demo/STTDF_selection.R: -
  NAMESPACE updated
  - STTDF_selection.R temporarily disabled

2013-07-11 06:00  jinlong

* trajectories/NAMESPACE, trajectories/R/STItoSTTDF.R,
  trajectories/demo/STItoSTTDF.R,
  trajectories/demo/STItoSTTDFdemo.R,
  trajectories/demo/geolife_reader.R,
  trajectories/man/STItoSTTDF.Rd, trajectories/notes: - notes
  updates
  - STItoSTTDF.R moved to R/
  - geolife.R updated
  - NAMESPACE updated

2013-07-09 15:27  edzer

* spacetime/DESCRIPTION, spacetime/R/Class-ST.R,
  spacetime/R/Class-STFDF.R, spacetime/R/Class-STIDF.R,
  spacetime/R/Class-STSDF.R, spacetime/R/Class-STTDF.R,
  spacetime/R/Class-xts.R, spacetime/R/coerce.R: changed
  "representation" into "contains" and "slots", as for R 3.0.0
  recommendations;
  changed import order of xts and zoo.;
  changed setClass to setOldClass for S3 class registration.

2013-07-09 08:01  jinlong

* trajectories/demo/STItoSTTDF.R,
  trajectories/demo/geolife_reader.R,
  trajectories/man/STItoSTTDF.Rd, trajectories/notes: - notes
  updated
  - multiple updated for the R scripts in demo directory

2013-07-09 06:44  jinlong

* trajectories/demo/STItoSTTDF.R, trajectories/man/STItoSTTDF.Rd,
  trajectories/notes: - Updated on notes
  - Added STItoSTTDF.Rd

2013-07-08 07:41  jinlong

* trajectories/demo/STItoSTTDF.R,
  trajectories/demo/geolife_reader.R,
  trajectories/demo/sttdf_computation.R, trajectories/notes: -
  STItoSTTDF.R added
  - geolife_reader.R added
  - STTDF_computation.R modified
  - notes updated

(wen)