--- - branch: MAIN date: Sat Oct 28 20:33:41 UTC 2023 files: - new: '1.6' old: '1.5' path: pkgsrc/biology/fasda/Makefile pathrev: pkgsrc/biology/fasda/Makefile@1.6 type: modified - new: '1.5' old: '1.4' path: pkgsrc/biology/fasda/PLIST pathrev: pkgsrc/biology/fasda/PLIST@1.5 type: modified - new: '1.5' old: '1.4' path: pkgsrc/biology/fasda/distinfo pathrev: pkgsrc/biology/fasda/distinfo@1.5 type: modified id: 20231028T203341Z.fd1cb6cb9495a7f5937c16a2e42c048537b63616 log: | biology/fasda: Update to 0.1.5 abundance: Update stringtie command to also produce gene-level abundances Output 0 for effective length for now to clearly indicate that it's invalid normalize: Add --debug option Updates for latest libxtend API Test -> Yeast-test Add Mouse-test suite with multiple mouse data options Streamline test scripts Changes: https://github.com/auerlab/fasda/releases module: pkgsrc subject: 'CVS commit: pkgsrc/biology/fasda' unixtime: '1698525221' user: bacon