Received: by mail.netbsd.org (Postfix, from userid 605) id 1D9EF84ECF; Sun, 18 Dec 2022 10:26:20 +0000 (UTC) Received: from localhost (localhost [127.0.0.1]) by mail.netbsd.org (Postfix) with ESMTP id 50F8584E83 for ; Sun, 18 Dec 2022 10:26:19 +0000 (UTC) X-Virus-Scanned: amavisd-new at netbsd.org Received: from mail.netbsd.org ([127.0.0.1]) by localhost (mail.netbsd.org [127.0.0.1]) (amavisd-new, port 10025) with ESMTP id WJkWdNInbCSs for ; Sun, 18 Dec 2022 10:26:18 +0000 (UTC) Received: from cvs.NetBSD.org (ivanova.netbsd.org [199.233.217.197]) by mail.netbsd.org (Postfix) with ESMTP id 5ED2A84CEF for ; Sun, 18 Dec 2022 10:26:18 +0000 (UTC) Received: by cvs.NetBSD.org (Postfix, from userid 500) id 58BB3FA90; Sun, 18 Dec 2022 10:26:18 +0000 (UTC) Content-Transfer-Encoding: 7bit Content-Type: multipart/mixed; boundary="_----------=_167135917888210" MIME-Version: 1.0 Date: Sun, 18 Dec 2022 10:26:18 +0000 From: "Makoto Fujiwara" Subject: CVS commit: pkgsrc/math/R-broom To: pkgsrc-changes@NetBSD.org Reply-To: mef@netbsd.org X-Mailer: log_accum Message-Id: <20221218102618.58BB3FA90@cvs.NetBSD.org> Sender: pkgsrc-changes-owner@NetBSD.org List-Id: Precedence: bulk List-Unsubscribe: This is a multi-part message in MIME format. --_----------=_167135917888210 Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset="US-ASCII" Module Name: pkgsrc Committed By: mef Date: Sun Dec 18 10:26:18 UTC 2022 Modified Files: pkgsrc/math/R-broom: Makefile distinfo Log Message: (math/R-broom) Updated 0.8.0 to 1.0.2 # broom 1.0.2 * The default `data` argument for `augment.coxph()` and `augment.survreg()` has been transitioned from `NULL` to `model.frame(x)` (#1126 by `@capnrefsmmat`). * Migrated 'ggplot2' from strong to weak dependency, i.e. moved from `Imports` to `Suggests`. * Fixed a bug where `augment()` results would not include residuals when the response term included a function call (#1121, #946, #937, #124). # broom 1.0.1 * Improves performance of `tidy.lm()` and `tidy.glm()` for full-rank fits (#1112 by `@capnrefsmmat`). * Moves forward with deprecation of tidiers for sparse matrices outputted from the Matrix package, initially soft-deprecated in broom 0.5.0. The Matrix tidiers were light wrappers around coercion methods that will now be deprecated from Matrix itself in the upcoming 1.4-2 release. The affected methods are `tidy.sparseMatrix()`, `tidy.dgCMatrix()`, and `tidy.dgTMatrix()`. Note that `tidy.confusionMatrix()`, for relevant objects outputted from the caret package, is unaffected (#1113). * `tidy.anova()` works again with `anova` objects from the `lme4` package (broken by addition of the `terms` column in the previous release) # broom 1.0.0 broom 1.0.0 is the first "production" release of the broom package, and includes a number of notable changes to both functionality and governance. As of this release, the broom team will be following a set of guidelines that clarify the scope of further development on the package. Given the package's wide use and long history, these guidelines _prioritize backward compatibility_ over internal consistency and completeness. You can read those guidelines [here](https://broom.tidymodels.org/articles/)! We've also made notable changes to error handling in this release: * Adds minimal ellipsis checking to warn on commonly misspecified arguments passed through ellipses. Notably: + `tidy()` methods will now warn when supplied an `exponentiate` argument if it will be ignored. + `augment()` methods will now warn when supplied a `newdata` argument if it will be ignored. * The warning regarding tidiers only maintained via dispatch to `lm` and `glm` is now displayed only once per session, per unique dispatch. That is, if a `class_a` object is tidied using a `(g)lm` method, broom will not warn when tidying `class_a` objects for the rest of the session, but if a `class_b` object is tidied using a `(g)lm` method in the same session, broom will warn again (#1101). Other fixes and improvements: * Add `exponentiate` argument to `tidy.boot()` (#1039). * Update in `tidy.htest()` converting matrix-columns to vector-columns (#1081). * Address failures in `tidy.glht()` with `conf.int = TRUE` (#1103). * Address failures in `tidy.zoo()` when input data does not have `colnames` (#1080). * Transition tidiers for bivariate linear or spline-based interpolation---using list tidiers to interface with objects from the akima package is now considered off-label. See the interp package for a FOSS alternative. * Address failures in `tidy.svyolr()` when `p.values = TRUE`. Instead of aliasing `tidy.polr()` directly, `tidy.svyolr()` lightly wraps that method and warns if `p.values` is supplied (#1107). * Adds a `term` column and introduces support for `car::lht()` output in `tidy.anova()` (#1106 by `@grantmcdermott`). * Adds a dedicated `glance.anova` method (which previously dispatched to the deprecated `glance.data.frame()` tidier, #1106 by `@grantmcdermott`). To generate a diff of this commit: cvs rdiff -u -r1.2 -r1.3 pkgsrc/math/R-broom/Makefile cvs rdiff -u -r1.4 -r1.5 pkgsrc/math/R-broom/distinfo Please note that diffs are not public domain; they are subject to the copyright notices on the relevant files. --_----------=_167135917888210 Content-Disposition: inline Content-Length: 1496 Content-Transfer-Encoding: binary Content-Type: text/x-diff; charset=us-ascii Modified files: Index: pkgsrc/math/R-broom/Makefile diff -u pkgsrc/math/R-broom/Makefile:1.2 pkgsrc/math/R-broom/Makefile:1.3 --- pkgsrc/math/R-broom/Makefile:1.2 Thu May 5 01:58:35 2022 +++ pkgsrc/math/R-broom/Makefile Sun Dec 18 10:26:18 2022 @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.2 2022/05/05 01:58:35 mef Exp $ +# $NetBSD: Makefile,v 1.3 2022/12/18 10:26:18 mef Exp $ R_PKGNAME= broom -R_PKGVER= 0.8.0 +R_PKGVER= 1.0.2 MAINTAINER= pkgsrc-users@NetBSD.org COMMENT= Convert Statistical Objects into Tidy Tibbles Index: pkgsrc/math/R-broom/distinfo diff -u pkgsrc/math/R-broom/distinfo:1.4 pkgsrc/math/R-broom/distinfo:1.5 --- pkgsrc/math/R-broom/distinfo:1.4 Thu May 5 01:58:35 2022 +++ pkgsrc/math/R-broom/distinfo Sun Dec 18 10:26:18 2022 @@ -1,5 +1,5 @@ -$NetBSD: distinfo,v 1.4 2022/05/05 01:58:35 mef Exp $ +$NetBSD: distinfo,v 1.5 2022/12/18 10:26:18 mef Exp $ -BLAKE2s (R/broom_0.8.0.tar.gz) = 86dca640cd540d430c4659e7eb60b30c14b0fc0a73821e6e07ddc32738f828ab -SHA512 (R/broom_0.8.0.tar.gz) = b9b0b7db1f151614f20fe42e7bfc34e1fc1aab1498e3280c67a530ba7972645694fb1638448827b14e70a56b9b743e51d7a3a7216c1f49067037ad837ce6e4fe -Size (R/broom_0.8.0.tar.gz) = 640392 bytes +BLAKE2s (R/broom_1.0.2.tar.gz) = a1e3f7450ed6dfa05083d58c7ee333e74f33029b05313d06c02fb81a4907bc7b +SHA512 (R/broom_1.0.2.tar.gz) = f7df906b54dbdf2980a5d523c28e75ef364fb60a2ca97932b5448971e7a72de07f32a7050bde7dc8b88d8893e24e744a8b4989fc4bde4319d1152ae11cfe991a +Size (R/broom_1.0.2.tar.gz) = 641801 bytes --_----------=_167135917888210--