Received: from localhost (localhost [127.0.0.1]) by mail.netbsd.org (Postfix) with ESMTP id 3318884D14 for ; Mon, 31 Jul 2023 14:38:37 +0000 (UTC) X-Virus-Scanned: amavisd-new at netbsd.org Received: from mail.netbsd.org ([IPv6:::1]) by localhost (mail.netbsd.org [IPv6:::1]) (amavisd-new, port 10025) with ESMTP id LwiOaOoX-3N8 for ; Mon, 31 Jul 2023 14:38:36 +0000 (UTC) Received: from cvs.NetBSD.org (ivanova.NetBSD.org [IPv6:2001:470:a085:999:28c:faff:fe03:5984]) by mail.netbsd.org (Postfix) with ESMTP id 8755B84CFF for ; Mon, 31 Jul 2023 14:38:36 +0000 (UTC) Received: by cvs.NetBSD.org (Postfix, from userid 500) id 84975FBDB; Mon, 31 Jul 2023 14:38:36 +0000 (UTC) Content-Transfer-Encoding: 7bit Content-Type: multipart/mixed; boundary="_----------=_1690814316470" MIME-Version: 1.0 Date: Mon, 31 Jul 2023 14:38:36 +0000 From: "Jason Bacon" Subject: CVS commit: pkgsrc/biology/rna-seq To: pkgsrc-changes@NetBSD.org Approved: commit_and_comment Reply-To: bacon@netbsd.org X-Mailer: log_accum Message-Id: <20230731143836.84975FBDB@cvs.NetBSD.org> This is a multi-part message in MIME format. --_----------=_1690814316470 Content-Disposition: inline Content-Transfer-Encoding: 8bit Content-Type: text/plain; charset="US-ASCII" Module Name: pkgsrc Committed By: bacon Date: Mon Jul 31 14:38:36 UTC 2023 Modified Files: pkgsrc/biology/rna-seq: Makefile Log Message: biology/rna-seq: Add rna-star dep to metapackage To generate a diff of this commit: cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/rna-seq/Makefile Please note that diffs are not public domain; they are subject to the copyright notices on the relevant files. --_----------=_1690814316470 Content-Disposition: inline Content-Length: 860 Content-Transfer-Encoding: binary Content-Type: text/x-diff; charset=us-ascii Modified files: Index: pkgsrc/biology/rna-seq/Makefile diff -u pkgsrc/biology/rna-seq/Makefile:1.6 pkgsrc/biology/rna-seq/Makefile:1.7 --- pkgsrc/biology/rna-seq/Makefile:1.6 Fri Jul 28 16:43:40 2023 +++ pkgsrc/biology/rna-seq/Makefile Mon Jul 31 14:38:36 2023 @@ -1,7 +1,7 @@ -# $NetBSD: Makefile,v 1.6 2023/07/28 16:43:40 bacon Exp $ +# $NetBSD: Makefile,v 1.7 2023/07/31 14:38:36 bacon Exp $ # -DISTNAME= rna-seq-1.2.1 +DISTNAME= rna-seq-1.2.2 CATEGORIES= biology meta-pkgs MASTER_SITES= # empty @@ -14,6 +14,7 @@ DEPENDS+= biolibc-tools>0:../../biology/ DEPENDS+= gffread>0:../../biology/gffread DEPENDS+= kallisto>0:../../biology/kallisto DEPENDS+= hisat2>0:../../biology/hisat2 +DEPENDS+= rna-star>0:../../biology/rna-star DEPENDS+= samtools>0:../../biology/samtools DEPENDS+= igv>0:../../biology/igv DEPENDS+= fasda>0:../../biology/fasda --_----------=_1690814316470--