Wed Aug 14 14:36:59 2019 UTC ()
Update to 3.6.1
Upstream changes:
CHANGES IN R 3.6.1:
INSTALLATION on a UNIX-ALIKE:
* The default detection of the shell variable libNN is overridden
for derivatives of Debian Linux, some of which have started to
have a /usr/lib64 directory. (E.g. Ubuntu 19.04.) As before, it
can be specified in config.site.
UTILITIES:
* R CMD config knows the values of AR and RANLIB, often set for LTO
builds.
DEPRECATED AND DEFUNCT:
* The use of a character vector with .Fortran() is formally
deprecated and gives a non-portability warning. (It has long
been strongly discouraged in 'Writing R Extensions'.)
BUG FIXES:
* On Windows, GUI package installation via menuInstallPkgs() works
again, thanks to Len Weil's and Duncan Murdoch's PR#17556.
* R CMD check on data() fixing PR#17558 thanks to Duncan Murdoch.
* quasi(*, variance = list(..)) now works more efficiently, and
should work in all cases fixing PR#17560. Further, quasi(var =
mu(1-mu)) and quasi(var = "mu ^ 3") now work, and quasi(variance
= "log(mu)") now gives a correct error message.
* Creation of lazy loading database during package installation is
again robust to Rprofile changing the current working directory
(PR#17559).
* boxplot(y ~ f, horizontal=TRUE) now produces correct x- and
y-labels.
* rbind.data.frame() allows to keep <NA> levels from factor columns
(PR#17562) via new option factor.exclude.
Additionally, it works in one more case with matrix-columns which
had been reported on 2017-01-16 by Krzysztof Banas.
* Correct messaging in C++ pragma checks in tools code for R CMD
check, fixing PR#17566 thanks to Xavier Robin.
* print()ing and auto-printing no longer differs for functions with
a user defined print.function, thanks to Bill Dunlap's report.
* On Windows, writeClipboard(.., format = <n>) now does correctly
pass format to the underlying C code, thanks to a bug report
(with patch) by Jenny Bryan.
* as.data.frame() treats 1D arrays the same as vectors, PR#17570.
* Improvements in smoothEnds(x, *) working with NAs (towards
runmed() working in that case, in the next version of R).
* vcov(glm(<quasi>), dispersion = *) works correctly again, fixing
PR#17571 thanks to Pavel Krivitsky.
* R CMD INSTALL of binary packages on Windows now works also with
per-directory locking.
* R CMD INSTALL and install.packages() on Windows are now more
robust against a locked file in an earlier installation of the
package to be installed. The default value of option
install.lock on Windows has been changed to TRUE.
* On Unix alikes (when readline is active), only expand tilde (~)
file names starting with a tilde, instead of almost all tildes.
* In R documentation (*.Rd) files, \item [..] is no longer treated
specially when rendered in LaTeX and hence pdf, but rather shows
the brackets in all cases.
(wen)
diff -r1.201 -r1.202 pkgsrc/math/R/Makefile
diff -r1.84 -r1.85 pkgsrc/math/R/distinfo
--- pkgsrc/math/R/Makefile 2019/08/11 13:21:43 1.201
+++ pkgsrc/math/R/Makefile 2019/08/14 14:36:59 1.202
| @@ -1,17 +1,16 @@ | | | @@ -1,17 +1,16 @@ |
1 | # $NetBSD: Makefile,v 1.201 2019/08/11 13:21:43 wiz Exp $ | | 1 | # $NetBSD: Makefile,v 1.202 2019/08/14 14:36:59 wen Exp $ |
2 | | | 2 | |
3 | DISTNAME= R-3.6.0 | | 3 | DISTNAME= R-3.6.1 |
4 | PKGREVISION= 3 | | | |
5 | CATEGORIES= math | | 4 | CATEGORIES= math |
6 | MASTER_SITES= ${MASTER_SITE_R_CRAN:=base/R-3/} | | 5 | MASTER_SITES= ${MASTER_SITE_R_CRAN:=base/R-3/} |
7 | | | 6 | |
8 | MAINTAINER= markd@NetBSD.org | | 7 | MAINTAINER= markd@NetBSD.org |
9 | HOMEPAGE= http://www.R-project.org/ | | 8 | HOMEPAGE= http://www.R-project.org/ |
10 | COMMENT= Statistical language for data analysis and graphics | | 9 | COMMENT= Statistical language for data analysis and graphics |
11 | LICENSE= gnu-gpl-v2 | | 10 | LICENSE= gnu-gpl-v2 |
12 | | | 11 | |
13 | USE_GCC_RUNTIME= yes | | 12 | USE_GCC_RUNTIME= yes |
14 | | | 13 | |
15 | BUILD_TARGET= all info | | 14 | BUILD_TARGET= all info |
16 | INSTALL_TARGET= install install-info | | 15 | INSTALL_TARGET= install install-info |
17 | TEST_TARGET= check | | 16 | TEST_TARGET= check |
--- pkgsrc/math/R/distinfo 2019/06/09 13:39:12 1.84
+++ pkgsrc/math/R/distinfo 2019/08/14 14:36:59 1.85
| @@ -1,11 +1,11 @@ | | | @@ -1,11 +1,11 @@ |
1 | $NetBSD: distinfo,v 1.84 2019/06/09 13:39:12 wen Exp $ | | 1 | $NetBSD: distinfo,v 1.85 2019/08/14 14:36:59 wen Exp $ |
2 | | | 2 | |
3 | SHA1 (R-3.6.0.tar.gz) = c8a1949e763d22ec3b1dbdd251afcb0f1d2d5c76 | | 3 | SHA1 (R-3.6.1.tar.gz) = 0041c025561b5622e3dc88cdedf82334620cd3c2 |
4 | RMD160 (R-3.6.0.tar.gz) = 56401ce9f413e07f3ff8afa74fb788484806fb16 | | 4 | RMD160 (R-3.6.1.tar.gz) = 0944f67117372acf342251c988d83b83839deccf |
5 | SHA512 (R-3.6.0.tar.gz) = b2e17b909b6387abb964492e2e9370f913295ca7ac99bab0e965c43ed3c4635e27468c326fb2bca3c529b03c731b0170d9e777a194ad4d6c5a983c050223d8c8 | | 5 | SHA512 (R-3.6.1.tar.gz) = fae7d114437c4b5d10fcb2a4265acd707ad2a4810eeb7c11e25caca1d85093a1495c2e13457b4894c1508830ec1b2be95379b7d54007cf3e574c2a9eea28ef80 |
6 | Size (R-3.6.0.tar.gz) = 30449618 bytes | | 6 | Size (R-3.6.1.tar.gz) = 30463021 bytes |
7 | SHA1 (patch-configure.ac) = 2732e3e0a39ee64ae4cba5c476f4754ecbd14942 | | 7 | SHA1 (patch-configure.ac) = 2732e3e0a39ee64ae4cba5c476f4754ecbd14942 |
8 | SHA1 (patch-m4_R.m4) = 704d5514e10adf0b5217bb71b06f44a612eca6e0 | | 8 | SHA1 (patch-m4_R.m4) = 704d5514e10adf0b5217bb71b06f44a612eca6e0 |
9 | SHA1 (patch-m4_cairo.m4) = a0c4ec68d7d6d3a73a2a24481d0dee8c192bf154 | | 9 | SHA1 (patch-m4_cairo.m4) = a0c4ec68d7d6d3a73a2a24481d0dee8c192bf154 |
10 | SHA1 (patch-src_library_stats_src_Makefile.in) = 4eb93292858392792c37a706399e2cef91821bbe | | 10 | SHA1 (patch-src_library_stats_src_Makefile.in) = 4eb93292858392792c37a706399e2cef91821bbe |
11 | SHA1 (patch-src_main_character.c) = 08d0096cd7a90131ec252342756499036a609c1c | | 11 | SHA1 (patch-src_main_character.c) = 08d0096cd7a90131ec252342756499036a609c1c |