Wed Mar 24 18:19:21 2021 UTC ()
biology/ad2vcf: import ad2vcf-0.1.2
ad2vdf extracts allelic depth info from a SAM stream and adds it to a
corresponding single-sample VCF file.
(bacon)
diff -r0 -r1.1 pkgsrc/biology/ad2vcf/DESCR
diff -r0 -r1.1 pkgsrc/biology/ad2vcf/Makefile
diff -r0 -r1.1 pkgsrc/biology/ad2vcf/PLIST
diff -r0 -r1.1 pkgsrc/biology/ad2vcf/distinfo
ad2vdf extracts allelic depth info from a SAM stream and adds it to a
corresponding single-sample VCF file.
# $NetBSD: Makefile,v 1.1 2021/03/24 18:19:21 bacon Exp $
DISTNAME= ad2vcf-0.1.2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= https://github.com/auerlab/ad2vcf
COMMENT= Add allelic depth info from a SAM stream to a VCF file
LICENSE= 2-clause-bsd
pre-build:
cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
do-test:
cd ${WRKSRC}/Test && ./run-test.sh
.include "../../biology/biolibc/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
@comment $NetBSD: PLIST,v 1.1 2021/03/24 18:19:21 bacon Exp $
bin/ad2vcf
man/man1/ad2vcf.1
$NetBSD: distinfo,v 1.1 2021/03/24 18:19:21 bacon Exp $
SHA1 (ad2vcf-0.1.2.tar.gz) = 15e8e90122003d2bc83542414ba65e4fa40182ae
RMD160 (ad2vcf-0.1.2.tar.gz) = 7e98382c79935f46ae259bd879b499966a470cb7
SHA512 (ad2vcf-0.1.2.tar.gz) = 64db184331207b00659909af219deb9dc352fad64f066e29fc7fabc28f3a60a9209319e589999cdb66551f267d1405d5be6f221c0147da33b4d924e87bec4ad3
Size (ad2vcf-0.1.2.tar.gz) = 15204 bytes