Wed Mar 24 18:22:53 2021 UTC ()
biology/vcf2hap: import vcf2hap-0.1.2
vcf2hap is a simple tool for generating a .hap file from a VCF. The .hap file
is required by haplohseq.
vcf2hap is extremely fast and requires a trivial amount of memory regardless of
the size of the VCF file.
(bacon)
diff -r0 -r1.1 pkgsrc/biology/vcf2hap/DESCR
diff -r0 -r1.1 pkgsrc/biology/vcf2hap/Makefile
diff -r0 -r1.1 pkgsrc/biology/vcf2hap/PLIST
diff -r0 -r1.1 pkgsrc/biology/vcf2hap/distinfo
vcf2hap is a simple tool for generating a .hap file from a VCF. The .hap file
is required by haplohseq.
vcf2hap is extremely fast and requires a trivial amount of memory regardless of
the size of the VCF file.
# $NetBSD: Makefile,v 1.1 2021/03/24 18:22:53 bacon Exp $
DISTNAME= vcf2hap-0.1.2
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
MAINTAINER= bacon@NetBSD.org
HOMEPAGE= https://github.com/auerlab/vcf2hap
COMMENT= Generate .hap file from VCF for haplohseq
LICENSE= 2-clause-bsd
pre-build:
cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
do-test:
cd ${WRKSRC}/Test && ./run-test.sh
.include "../../biology/biolibc/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
@comment $NetBSD: PLIST,v 1.1 2021/03/24 18:22:53 bacon Exp $
bin/vcf2hap
man/man1/vcf2hap.1
$NetBSD: distinfo,v 1.1 2021/03/24 18:22:53 bacon Exp $
SHA1 (vcf2hap-0.1.2.tar.gz) = a18bc1746ec4df4be88d635c18b0a6b240d2c309
RMD160 (vcf2hap-0.1.2.tar.gz) = a7ec7f863888e005b84f59db7c2787ec19e960de
SHA512 (vcf2hap-0.1.2.tar.gz) = 4a4b3c0c63e711f7f9a57706c675bb02f9d55976b6ee3aee1e1d1eeb14f2d92a62ad952e2c03fbe5ab525174b01260b5cb305c9980b48411618bf7e9669ae7f6
Size (vcf2hap-0.1.2.tar.gz) = 197782 bytes