Sat Aug 28 18:40:06 2021 UTC ()
biology/vcf2hap: Update to 0.1.3.12

Updates for libxtend and bioloibc API changes


(bacon)
diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/Makefile
diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/PLIST
diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/distinfo
cvs diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/Makefile (expand / switch to unified diff)

--- pkgsrc/biology/vcf2hap/Makefile 2021/06/11 17:09:40 1.2
+++ pkgsrc/biology/vcf2hap/Makefile 2021/08/28 18:40:06 1.3
@@ -1,18 +1,19 @@ @@ -1,18 +1,19 @@
1# $NetBSD: Makefile,v 1.2 2021/06/11 17:09:40 bacon Exp $ 1# $NetBSD: Makefile,v 1.3 2021/08/28 18:40:06 bacon Exp $
2 2
3DISTNAME= vcf2hap-0.1.3 3DISTNAME= vcf2hap-0.1.3.12
4CATEGORIES= biology 4CATEGORIES= biology
5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/} 5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
 6GITHUB_TAG= 3626f5a320be8176d359b487682385fa6ab0f197
6 7
7MAINTAINER= bacon@NetBSD.org 8MAINTAINER= bacon@NetBSD.org
8HOMEPAGE= https://github.com/auerlab/vcf2hap 9HOMEPAGE= https://github.com/auerlab/vcf2hap
9COMMENT= Generate .hap file from VCF for haplohseq 10COMMENT= Generate .hap file from VCF for haplohseq
10LICENSE= 2-clause-bsd 11LICENSE= 2-clause-bsd
11 12
12pre-build: 13pre-build:
13 cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend 14 cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
14 15
15do-test: 16do-test:
16 cd ${WRKSRC}/Test && ./run-test.sh 17 cd ${WRKSRC}/Test && ./run-test.sh
17 18
18.include "../../devel/libxtend/buildlink3.mk" 19.include "../../devel/libxtend/buildlink3.mk"
cvs diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/PLIST (expand / switch to unified diff)

--- pkgsrc/biology/vcf2hap/PLIST 2021/06/11 17:09:40 1.2
+++ pkgsrc/biology/vcf2hap/PLIST 2021/08/28 18:40:06 1.3
@@ -1,3 +1,3 @@ @@ -1,3 +1,3 @@
1@comment $NetBSD: PLIST,v 1.2 2021/06/11 17:09:40 bacon Exp $ 1@comment $NetBSD: PLIST,v 1.3 2021/08/28 18:40:06 bacon Exp $
2bin/vcf2hap 2bin/vcf2hap
3man/man1/vcf2hap.1 3man/man1/vcf2hap.1
cvs diff -r1.2 -r1.3 pkgsrc/biology/vcf2hap/distinfo (expand / switch to unified diff)

--- pkgsrc/biology/vcf2hap/distinfo 2021/06/11 17:09:40 1.2
+++ pkgsrc/biology/vcf2hap/distinfo 2021/08/28 18:40:06 1.3
@@ -1,6 +1,6 @@ @@ -1,6 +1,6 @@
1$NetBSD: distinfo,v 1.2 2021/06/11 17:09:40 bacon Exp $ 1$NetBSD: distinfo,v 1.3 2021/08/28 18:40:06 bacon Exp $
2 2
3SHA1 (vcf2hap-0.1.3.tar.gz) = 20df7279310b3ca3a22920fe56e1ab9533bae9e6 3SHA1 (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 1cab0392fb40d2457079a9bf2d8ab5ef0880d499
4RMD160 (vcf2hap-0.1.3.tar.gz) = 0907219e943391cd5657b980ee1a54d506762cd4 4RMD160 (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 3c51d3b48fb88c48793799412aac7115a9b7228b
5SHA512 (vcf2hap-0.1.3.tar.gz) = d5dbba976f0e9b6d7b6d3c176780297a87fa4c753b7776fb72024452dfa35ef45e822f974f2825b60836b82d16af267cf3aee11cb7ab8171187fe8977b23a28d 5SHA512 (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = b97e7fb8bf13f03a90248d8002c46546e0932c1463b6fe4480454b9643de4695ca82f7c49a5ab8ef86e6eb4a931bf6e588334998edfeb29a5fc67b379a927ebb
6Size (vcf2hap-0.1.3.tar.gz) = 198981 bytes 6Size (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 200650 bytes