Tue Dec 14 19:10:43 2021 UTC ()
biology/vcf-split: Update to 0.1.3.3

Transfer header from multi-sample input
Updates for evolving libxtend and biolibc APIs
Add --version flag
Numerous minor fixes and enhancements


(bacon)
diff -r1.3 -r1.4 pkgsrc/biology/vcf-split/Makefile
diff -r1.3 -r1.4 pkgsrc/biology/vcf-split/PLIST
diff -r1.5 -r1.6 pkgsrc/biology/vcf-split/distinfo
cvs diff -r1.3 -r1.4 pkgsrc/biology/vcf-split/Makefile (expand / switch to unified diff)

--- pkgsrc/biology/vcf-split/Makefile 2021/08/28 18:39:37 1.3
+++ pkgsrc/biology/vcf-split/Makefile 2021/12/14 19:10:43 1.4
@@ -1,18 +1,19 @@ @@ -1,18 +1,19 @@
1# $NetBSD: Makefile,v 1.3 2021/08/28 18:39:37 bacon Exp $ 1# $NetBSD: Makefile,v 1.4 2021/12/14 19:10:43 bacon Exp $
2 2
3DISTNAME= vcf-split-0.1.2.14 3DISTNAME= vcf-split-0.1.3.3
4CATEGORIES= biology 4CATEGORIES= biology
5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/} 5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
6GITHUB_TAG= bc2eba0b5d5f41443795d7bd465569ba5da27315 6GITHUB_TAG= 19713a4e0f739840335ced2e170b822398688146
7 7
8MAINTAINER= bacon@NetBSD.org 8MAINTAINER= bacon@NetBSD.org
9HOMEPAGE= https://github.com/auerlab/vcf-split 9HOMEPAGE= https://github.com/auerlab/vcf-split
10COMMENT= Split a multi-sample VCF into single-sample VCFs 10COMMENT= Split a multi-sample VCF into single-sample VCFs
11LICENSE= 2-clause-bsd 11LICENSE= 2-clause-bsd
12 12
 13MAKE_ENV+= VERSION=${PKGVERSION}
 14
13pre-build: 15pre-build:
14 cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend 16 cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
15 17
16.include "../../devel/libxtend/buildlink3.mk" 
17.include "../../biology/biolibc/buildlink3.mk" 18.include "../../biology/biolibc/buildlink3.mk"
18.include "../../mk/bsd.pkg.mk" 19.include "../../mk/bsd.pkg.mk"
cvs diff -r1.3 -r1.4 pkgsrc/biology/vcf-split/PLIST (expand / switch to unified diff)

--- pkgsrc/biology/vcf-split/PLIST 2021/08/28 18:39:37 1.3
+++ pkgsrc/biology/vcf-split/PLIST 2021/12/14 19:10:43 1.4
@@ -1,3 +1,3 @@ @@ -1,3 +1,3 @@
1@comment $NetBSD: PLIST,v 1.3 2021/08/28 18:39:37 bacon Exp $ 1@comment $NetBSD: PLIST,v 1.4 2021/12/14 19:10:43 bacon Exp $
2bin/vcf-split 2bin/vcf-split
3man/man1/vcf-split.1 3man/man1/vcf-split.1
cvs diff -r1.5 -r1.6 pkgsrc/biology/vcf-split/distinfo (expand / switch to unified diff)

--- pkgsrc/biology/vcf-split/distinfo 2021/10/26 10:03:44 1.5
+++ pkgsrc/biology/vcf-split/distinfo 2021/12/14 19:10:43 1.6
@@ -1,5 +1,5 @@ @@ -1,5 +1,5 @@
1$NetBSD: distinfo,v 1.5 2021/10/26 10:03:44 nia Exp $ 1$NetBSD: distinfo,v 1.6 2021/12/14 19:10:43 bacon Exp $
2 2
3BLAKE2s (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = 0eb99f0d170977fa72cc6966d6c87cb46a96cf6593af3cbca89005ad518dbe8b 3BLAKE2s (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = 264396b433ffa50610ff6314b2b8d6c063aadbdb412d7de1066d53f34ed8e912
4SHA512 (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = fd9481bf9d92967261006bd844b3408f2c33d999a314bd702701da589904bf1322e33723cb26f3753e38a640cc28ffaadabda2ca46a5423c2ac65a020da7aad2 4SHA512 (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = bc64752c1a021509c40a9aa5229de77c239253be28828b2512fbd5d1be436ab372c052c4411915db8495ca47071e7eda538b35b4278bc37aa5fa440e8caed5a9
5Size (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = 16161 bytes 5Size (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = 21921 bytes