Sun Oct 29 22:58:03 2023 UTC ()
biology/biolibc-tools: Update to 0.1.4.13

Updates for new libxtend API


(bacon)
diff -r1.10 -r1.11 pkgsrc/biology/biolibc-tools/Makefile
diff -r1.9 -r1.10 pkgsrc/biology/biolibc-tools/PLIST
diff -r1.11 -r1.12 pkgsrc/biology/biolibc-tools/distinfo
cvs diff -r1.10 -r1.11 pkgsrc/biology/biolibc-tools/Makefile (expand / switch to unified diff)

--- pkgsrc/biology/biolibc-tools/Makefile 2023/08/12 14:51:02 1.10
+++ pkgsrc/biology/biolibc-tools/Makefile 2023/10/29 22:58:03 1.11
@@ -1,19 +1,19 @@ @@ -1,19 +1,19 @@
1# $NetBSD: Makefile,v 1.10 2023/08/12 14:51:02 bacon Exp $ 1# $NetBSD: Makefile,v 1.11 2023/10/29 22:58:03 bacon Exp $
2 2
3DISTNAME= biolibc-tools-0.1.4.9 3DISTNAME= biolibc-tools-0.1.4.13
4CATEGORIES= biology 4CATEGORIES= biology
5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/} 5MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
6GITHUB_TAG= 6d9604303fa43418a423840c916407af2b069184 6GITHUB_TAG= 0375b83239ea352a708112ad1dc87606c174f11f
7 7
8OWNER= bacon@NetBSD.org 8OWNER= bacon@NetBSD.org
9HOMEPAGE= https://github.com/auerlab/biolibc-tools 9HOMEPAGE= https://github.com/auerlab/biolibc-tools
10COMMENT= High-performance bioinformatics tools based on biolibc 10COMMENT= High-performance bioinformatics tools based on biolibc
11LICENSE= 2-clause-bsd 11LICENSE= 2-clause-bsd
12 12
13BUILD_TARGET= depend all 13BUILD_TARGET= depend all
14MAKE_ENV+= VERSION=${PKGVERSION} 14MAKE_ENV+= VERSION=${PKGVERSION}
15INSTALL_TARGET= install-strip 15INSTALL_TARGET= install-strip
16 16
17LDFLAGS.SunOS+= -lresolv -lsocket -lnsl 17LDFLAGS.SunOS+= -lresolv -lsocket -lnsl
18 18
19pre-build: 19pre-build:
cvs diff -r1.9 -r1.10 pkgsrc/biology/biolibc-tools/PLIST (expand / switch to unified diff)

--- pkgsrc/biology/biolibc-tools/PLIST 2023/08/12 14:51:02 1.9
+++ pkgsrc/biology/biolibc-tools/PLIST 2023/10/29 22:58:03 1.10
@@ -1,14 +1,14 @@ @@ -1,14 +1,14 @@
1@comment $NetBSD: PLIST,v 1.9 2023/08/12 14:51:02 bacon Exp $ 1@comment $NetBSD: PLIST,v 1.10 2023/10/29 22:58:03 bacon Exp $
2bin/blt 2bin/blt
3libexec/biolibc-tools/chrom-lens 3libexec/biolibc-tools/chrom-lens
4libexec/biolibc-tools/deromanize 4libexec/biolibc-tools/deromanize
5libexec/biolibc-tools/ensemblid2gene 5libexec/biolibc-tools/ensemblid2gene
6libexec/biolibc-tools/extract-seq 6libexec/biolibc-tools/extract-seq
7libexec/biolibc-tools/fasta2seq 7libexec/biolibc-tools/fasta2seq
8libexec/biolibc-tools/fastq-derep.sh 8libexec/biolibc-tools/fastq-derep.sh
9libexec/biolibc-tools/fastx-derep 9libexec/biolibc-tools/fastx-derep
10libexec/biolibc-tools/fastx-stats 10libexec/biolibc-tools/fastx-stats
11libexec/biolibc-tools/fastx2tsv 11libexec/biolibc-tools/fastx2tsv
12libexec/biolibc-tools/find-orfs 12libexec/biolibc-tools/find-orfs
13libexec/biolibc-tools/gff3-to-bed 13libexec/biolibc-tools/gff3-to-bed
14libexec/biolibc-tools/uniq-seqs.awk 14libexec/biolibc-tools/uniq-seqs.awk
cvs diff -r1.11 -r1.12 pkgsrc/biology/biolibc-tools/distinfo (expand / switch to unified diff)

--- pkgsrc/biology/biolibc-tools/distinfo 2023/08/12 14:51:02 1.11
+++ pkgsrc/biology/biolibc-tools/distinfo 2023/10/29 22:58:03 1.12
@@ -1,5 +1,5 @@ @@ -1,5 +1,5 @@
1$NetBSD: distinfo,v 1.11 2023/08/12 14:51:02 bacon Exp $ 1$NetBSD: distinfo,v 1.12 2023/10/29 22:58:03 bacon Exp $
2 2
3BLAKE2s (biolibc-tools-0.1.4.9-6d9604303fa43418a423840c916407af2b069184.tar.gz) = d8bc31f97acf3957cb32a117be7a26ca4ef7c8548b7fa3d4424f0cce8e87a2a8 3BLAKE2s (biolibc-tools-0.1.4.13-0375b83239ea352a708112ad1dc87606c174f11f.tar.gz) = 2cfef255c882356d71781311fb9df7dc315f42ac1d68b66cfdc0b4eb3bce73ed
4SHA512 (biolibc-tools-0.1.4.9-6d9604303fa43418a423840c916407af2b069184.tar.gz) = 63fec7604fdab6f698776c8c7c306b2f45681c569f8f40ebed5fbe3c6e16b5cb636ad5d70d2f15ab10e68fdc27ffa0c7d27d5e612588b3647684050e47c5f463 4SHA512 (biolibc-tools-0.1.4.13-0375b83239ea352a708112ad1dc87606c174f11f.tar.gz) = 3bd19abe3c47297735b21ee6577324c98daa83d47d3f13e7ab7d2cadba201ea62dd569626ea71dd8a56de7f71169b3f1452574e80fde4516e3ae1ba6133b16af
5Size (biolibc-tools-0.1.4.9-6d9604303fa43418a423840c916407af2b069184.tar.gz) = 29365 bytes 5Size (biolibc-tools-0.1.4.13-0375b83239ea352a708112ad1dc87606c174f11f.tar.gz) = 29326 bytes