Mon Apr 8 21:53:32 2024 UTC (47d)
biology/vsearch: Update to 2.27.1

Fix weak_id option and make searches report weak hits in some cases

Changes: https://github.com/torognes/vsearch/releases
Reported by: portscout


(bacon)
diff -r1.9 -r1.10 pkgsrc/biology/vsearch/Makefile
diff -r1.8 -r1.9 pkgsrc/biology/vsearch/PLIST
diff -r1.11 -r1.12 pkgsrc/biology/vsearch/distinfo
cvs diff -r1.9 -r1.10 pkgsrc/biology/vsearch/Makefile (expand / switch to unified diff)

--- pkgsrc/biology/vsearch/Makefile 2024/01/23 13:26:59 1.9
+++ pkgsrc/biology/vsearch/Makefile 2024/04/08 21:53:32 1.10
@@ -1,16 +1,16 @@ @@ -1,16 +1,16 @@
1# $NetBSD: Makefile,v 1.9 2024/01/23 13:26:59 bacon Exp $ 1# $NetBSD: Makefile,v 1.10 2024/04/08 21:53:32 bacon Exp $
2 2
3DISTNAME= vsearch-2.27.0 3DISTNAME= vsearch-2.27.1
4CATEGORIES= biology 4CATEGORIES= biology
5MASTER_SITES= ${MASTER_SITE_GITHUB:=torognes/} 5MASTER_SITES= ${MASTER_SITE_GITHUB:=torognes/}
6GITHUB_TAG= v${PKGVERSION_NOREV} 6GITHUB_TAG= v${PKGVERSION_NOREV}
7 7
8MAINTAINER= bacon@NetBSD.org 8MAINTAINER= bacon@NetBSD.org
9HOMEPAGE= https://github.com/torognes/vsearch 9HOMEPAGE= https://github.com/torognes/vsearch
10COMMENT= Versatile open-source tool for metagenomics 10COMMENT= Versatile open-source tool for metagenomics
11LICENSE= gnu-gpl-v3 11LICENSE= gnu-gpl-v3
12 12
13# Works on powerpc64, but only in little endian mode 13# Works on powerpc64, but only in little endian mode
14ONLY_FOR_PLATFORM= *-*-aarch64* *-*-powerpc64 *-*-x86_64 14ONLY_FOR_PLATFORM= *-*-aarch64* *-*-powerpc64 *-*-x86_64
15 15
16USE_LANGUAGES= c c++ 16USE_LANGUAGES= c c++
cvs diff -r1.8 -r1.9 pkgsrc/biology/vsearch/PLIST (expand / switch to unified diff)

--- pkgsrc/biology/vsearch/PLIST 2024/01/23 13:26:59 1.8
+++ pkgsrc/biology/vsearch/PLIST 2024/04/08 21:53:32 1.9
@@ -1,3 +1,3 @@ @@ -1,3 +1,3 @@
1@comment $NetBSD: PLIST,v 1.8 2024/01/23 13:26:59 bacon Exp $ 1@comment $NetBSD: PLIST,v 1.9 2024/04/08 21:53:32 bacon Exp $
2bin/vsearch 2bin/vsearch
3man/man1/vsearch.1 3man/man1/vsearch.1
cvs diff -r1.11 -r1.12 pkgsrc/biology/vsearch/distinfo (expand / switch to unified diff)

--- pkgsrc/biology/vsearch/distinfo 2024/01/23 13:26:59 1.11
+++ pkgsrc/biology/vsearch/distinfo 2024/04/08 21:53:32 1.12
@@ -1,5 +1,5 @@ @@ -1,5 +1,5 @@
1$NetBSD: distinfo,v 1.11 2024/01/23 13:26:59 bacon Exp $ 1$NetBSD: distinfo,v 1.12 2024/04/08 21:53:32 bacon Exp $
2 2
3BLAKE2s (vsearch-2.27.0.tar.gz) = 8b0ae42005ef3abc67ea10385210b3e75a8abdeec401180d819d7e4e70e8e656 3BLAKE2s (vsearch-2.27.1.tar.gz) = da1461afaa42b8483f1f9159eb7b30978d7b3fdbfc6e24bfca5f43d8e69e25fb
4SHA512 (vsearch-2.27.0.tar.gz) = 521f0b031f42d0fd39ecabde683db765462874de6111bf6c1d52de5b78e332c4b5f85ad20587ad14afd27c3c923de0c65bf6e8cd9a8bb26e12aebdd2dab7e586 4SHA512 (vsearch-2.27.1.tar.gz) = c9d783f7b2367d5479f3bb1ac3b7a2edd4dd729a9a322a592fe2b5edde46a4885442efeb6a0f06f91faa4af922e9c739b28c2739aab7a0f1106fbc8bb5b5dc11
5Size (vsearch-2.27.0.tar.gz) = 269210 bytes 5Size (vsearch-2.27.1.tar.gz) = 269179 bytes