Removed graphics/go-smartcrop

(bsiegert)

go-smartcrop: remove.

Only hugo ever depended on this, and it no longer does. Not useful on its own.

(bsiegert)

doc: note update of ISC DHCP packages to 4.4.2p1 (4.4.2-P1)

net/isc-dhcp4
net/isc-dhclient4
net/isc-dhcpd4
net/isc-dhcrelay4

(taca)

net/isc-dhcp4: update to 4.4.2p1

Update isc-dhcp4 to 4.4.2p1 (4.4.2-P1).

Changes since 4.4.2 (Bug Fixes)

! Corrected a buffer overwrite possible when parsing hexadecimal
  literals with more than 1024 octets. Reported by Jon Franklin from Dell,
  and also by Pawel Wieczorkiewicz from Amazon Web Services.
  [Gitlab #182]
  CVE: CVE-2021-25217

(taca)

devel/ruby-cucumber-tag_expressions: renamed to ruby-cucumber-tag-expressions

Forgot to commit of removing renamed package.

(taca)

Updated devel/py-construct, devel/py-cookiecutter

(adam)

py-cookiecutter: updated to 1.7.3

1.7.3:
Fixed jinja2 and markupsafe dependencies

(adam)

py-construct: updated to 2.10.67

2.10.67:
Unknown changes

(adam)

py-django-taggit: mark as not compatible with Python 2.7

(adam)

py-rich: fix typo

(adam)

README: Add a URL for the Matrix room.

(jperkin)

doc: Updated net/tigervnc to 1.11.0.1.20.11nb2

(wiz)

tigervnc: fix dependency

Use Xfont2 instead of Xfont, reported by Joern Clausen
in PR 56211.

Explicitly set sysconfdir to try fixing the other part
of that PR.

(wiz)

nspr: update to 4.31.

NSPR 4.31 contains the following change:
- avoid a race in multithreaded code

XXX: the 32-bit SunOS file was lost from the PLIST at
some point in the past, anyone on that platform please add it,
if still needed.

(wiz)

devel/Makefile: + ruby-cucumber-tag_expressions

(wiz)

Updated audio/faudio, security/sudo

(adam)

sudo: updated to 1.9.7

What's new in Sudo 1.9.7

* The "fuzz" Makefile target now runs all the fuzzers for 8192
  passes (can be overridden via the FUZZ_RUNS variable).  This makes
  it easier to run the fuzzers in-tree.  To run a fuzzer indefinitely,
  set FUZZ_RUNS=-1, e.g. "make FUZZ_RUNS=-1 fuzz".

* Fixed fuzzing on FreeBSD where the ld.lld linker returns an
  error by default when a symbol is multiply-defined.

* Added support for determining local IPv6 addresses on systems
  that lack the getifaddrs() function.  This now works on AIX,
  HP-UX and Solaris (at least).

* Fixed a bug introduced in sudo 1.9.6 that caused "sudo -V" to
  report a usage error.  Also, when invoked as sudoedit, sudo now
  allows a more restricted set of options that matches the usage
  statement and documentation.

* Fixed a crash in sudo_sendlog when the specified certificate
  or key does not exist or is invalid.

* Fixed a compilation error when sudo is configured with the
  --disable-log-client option.

* Sudo's limited support for SUCCESS=return entries in nsswitch.conf
  is now documented.

* Sudo now requires autoconf 2.70 or higher to regenerate the
  configure script.

* sudo_logsrvd now has a relay mode which can be used to create
  a hierarchy of log servers.  By default, when a relay server is
  defined, messages from the client are forwarded immediately to
  the relay.  However, if the "store_first" setting is enabled,
  the log will be stored locally until the command completes and
  then relayed.

* Sudo now links with OpenSSL by default if it is available unless
  the --disable-openssl configure option is used or both the
  --disable-log-client and --disable-log-server configure options
  are specified.

* Fixed configure's Python version detection when the version minor
  number is more than a single digit, for example Python 3.10.

* The sudo Python module tests now pass for Python 3.10.

* Sudo will now avoid changing the datasize resource limit
  as long as the existing value is at least 1GB.  This works around
  a problem on 64-bit HP-UX where it is not possible to exactly
  restore the original datasize limit.

* Fixed a race condition that could result in a hang when sudo is
  executed by a process where the SIGCHLD handler is set to SIG_IGN.

* Fixed an out-of-bounds read in sudoedit and visudo when the
  EDITOR, VISUAL or SUDO_EDITOR environment variables end in an
  unescaped backslash.  Also fixed the handling of quote characters
  that are escaped by a backslash.

* Fixed a bug that prevented the "log_server_verify" sudoers option
  from taking effect.

* The sudo_sendlog utility has a new -s option to cause it to stop
  sending I/O records after a user-specified elapsed time.  This
  can be used to test the I/O log restart functionality of sudo_logsrvd.

* Fixed a crash introduced in sudo 1.9.4 in sudo_logsrvd when
  attempting to restart an interrupted I/O log transfer.

* The TLS connection timeout in the sudoers log client was previously
  hard-coded to 10 seconds.  It now uses the value of log_server_timeout.

* The configure script now outputs a summary of the user-configurable
  options at the end, separate from output of configure script tests.

* Corrected the description of which groups may be specified via the
  -g option in the Runas_Spec section.

(adam)

faudio: updated to 21.05

21.05

New Features:

Added SetAudioTrackEXT extension
Update to FNA3D 21.05
Update to FAudio 21.05
Fixes:

SDL2_FNAPlatform:
Changing window focus no longer unsets fullscreen, except on X11
Using "alt-tab" to switch focus out while fullscreen on Windows no longer causes error beeps when attempting to switch focus back in
Fix mouse support on Wayland

(adam)

doc/TODO: add more Xfce4 packages with 4.16 releases

(And it's probably best to target the Thunar stable release branch.)

(gutteridge)

doc: Updated sysutils/xfce4-thunar to 1.8.17

(gutteridge)

xfce4-thunar: update to 1.8.17

Change log:

1.8.17
======
- Dont execute files, passed via command line due to security risks
  That Fixes CVE-2021-32563

- Fix combo box entry order (Issue #435)
- Translation Updates:
  Albanian, Amharic, Arabic, Armenian, Armenian (Armenia), Asturian,
  Basque, Belarusian, Bengali, Bulgarian, Catalan, Chinese (China),
  Chinese (Hong Kong), Chinese (Taiwan), Croatian, Czech, Danish,
  Dutch, Eastern Armenian, English (Australia), English (United
  Kingdom), Esperanto, Estonian, Finnish, French, Galician, German,
  Greek, Hebrew, Hungarian, Icelandic, Indonesian, Interlingue,
  Italian, Japanese, Kazakh, Korean, Latvian, Lithuanian, Malay,
  Norwegian Bokm奪l, Norwegian Nynorsk, Occitan (post 1500), Panjabi
  (Punjabi), Persian (Iran), Polish, Portuguese, Portuguese (Brazil),
  Romanian, Russian, Serbian, Slovak, Spanish, Swedish, Telugu, Thai,
  Turkish, Ukrainian, Urdu, Urdu (Pakistan), Vietnamese

1.8.16
======
- Add missing parameter to ThunarBrowserPokeDeviceFunc function
- Fix error for custom date format in details view (issue #389)
- Fix unavailable rubber banding in detailed view (Issue #326)
- Ghost file ocasionally remains when dropping file into directory (Fixes #312)
- Translation Updates:
  Albanian, Armenian, Armenian (Armenia), Basque, Belarusian, Chinese
  (China), Chinese (Hong Kong), Croatian, Eastern Armenian, Esperanto,
  Estonian, Finnish, French, Hebrew, Hungarian, Indonesian, Interlingue,
  Italian, Kazakh, Korean, Lithuanian, Portuguese, Slovak, Swedish

(gutteridge)

doc: Updated x11/xfce4-desktop to 4.14.4

(gutteridge)

xfce4-desktop: update to 4.14.4

Also address a pkglint warning, add BUILD_DEFS.

Change log:

4.14.4
======
- Fix Applications Menu memory leak (Bug #102)
- Translation Updates:
  Amharic, Arabic, Asturian, Basque, Belarusian, Danish, English
  (Australia), English (Canada), Greek, Icelandic, Indonesian,
  Interlingue, Norwegian Nynorsk, Occitan (post 1500), Portuguese,
  Romanian, Slovenian, Uyghur, Uzbek

4.14.3
======
- Avoid redundant calls to backdrop_changed_cb (Bug #16773)
- Fix memory leak when reconnecting DP monitor (Bug #16314)
- Fix transparent background color (Bug #16380)
- Do not insert hyphens at intra-word line breaks (Bug #16339)
- Translation Updates:
  Albanian, Amharic, Arabic, Armenian (Armenia), Asturian, Basque,
  Belarusian, Belarusian (Tarask), Bulgarian, Catalan, Chinese (China),
  Chinese (Hong Kong), Chinese (Taiwan), Croatian, Czech, Danish,
  Dutch, Eastern Armenian, English (Australia), English (Canada),
  English (United Kingdom), Estonian, Finnish, French, Galician,
  Georgian, German, Greek, Hebrew, Hungarian, Icelandic, Indonesian,
  Interlingue, Italian, Japanese, Kazakh, Korean, Lithuanian, Malay,
  Norwegian Bokm奪l, Norwegian Nynorsk, Occitan (post 1500), Persian
  (Iran), Polish, Portuguese, Portuguese (Brazil), Romanian, Russian,
  Serbian, Slovak, Slovenian, Spanish, Swedish, Thai, Turkish,
  Ukrainian, Uyghur, Uzbek

(gutteridge)

README: mention Matrix room

(gdt)

Mention libera.chat instead.

(maya)

Don't use libdl on BSD systems
Bump PKGREVISION

(bouyer)

doc: Added biology/beagle version 5.2

(brook)

Added biology/beagle version 5.2

(brook)

biology/beagle: added beagle 5.2

Introduction

Beagle is a software package for phasing genotypes and for imputing
ungenotyped markers. Beagle version 5.2 provides significantly faster
genotype phasing than version 5.1

Citation

If you use Beagle in a published analysis, please report the program
version and cite the appropriate article.

The Beagle 5.2 genotype imputation method is described in:

  B L Browning, Y Zhou, and S R Browning (2018). A one-penny imputed
  genome from next generation reference panels. Am J Hum Genet
  103(3):338-348. doi:10.1016/j.ajhg.2018.07.015

The most recent reference for Beagle's phasing method is:

  S R Browning and B L Browning (2007) Rapid and accurate haplotype
  phasing and missing data inference for whole genome association
  studies by use of localized haplotype clustering. Am J Hum Genet
  81:1084-1097. doi:10.1086/521987

This reference will be updated when the Beagle version 5 phasing
method is published.

(brook)

doc: Added biology/racon version 1.4.3

(brook)

Added biology/racon 1.4.3

(brook)

biology/racon: add racon 1.4.3

## Description

Racon is intended as a standalone consensus module to correct raw
contigs generated by rapid assembly methods which do not include a
consensus step. The goal of Racon is to generate genomic consensus
which is of similar or better quality compared to the output generated
by assembly methods which employ both error correction and consensus
steps, while providing a speedup of several times compared to those
methods. It supports data produced by both Pacific Biosciences and
Oxford Nanopore Technologies.

Racon can be used as a polishing tool after the assembly with **either
Illumina data or data produced by third generation of
sequencing**. The type of data inputed is automatically detected.

Racon takes as input only three files: contigs in FASTA/FASTQ format,
reads in FASTA/FASTQ format and overlaps/alignments between the reads
and the contigs in MHAP/PAF/SAM format. Output is a set of polished
contigs in FASTA format printed to stdout. All input files **can be
compressed with gzip** (which will have impact on parsing time).

Racon can also be used as a read error-correction tool. In this
scenario, the MHAP/PAF/SAM file needs to contain pairwise overlaps
between reads **including dual overlaps**.

A **wrapper script** is also available to enable easier usage to the
end-user for large datasets. It has the same interface as racon but
adds two additional features from the outside. Sequences can be
**subsampled** to decrease the total execution time (accuracy might be
lower) while target sequences can be **split** into smaller chunks and
run sequentially to decrease memory consumption. Both features can be
run at the same time as well.

(brook)

doc: Added biology/minimap2 version 2.18

(brook)

Add biology/minimap2 2.18

(brook)

biology/minimap2: add minimap 2.18

## Users' Guide

Minimap2 is a versatile sequence alignment program that aligns DNA or
mRNA sequences against a large reference database. Typical use cases
include: (1) mapping PacBio or Oxford Nanopore genomic reads to the
human genome; (2) finding overlaps between long reads with error rate
up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore
cDNA or Direct RNA reads against a reference genome; (4) aligning
Illumina single- or paired-end reads; (5) assembly-to-assembly
alignment; (6) full-genome alignment between two closely related
species with divergence below ~15%.

For ~10kb noisy reads sequences, minimap2 is tens of times faster than
mainstream long-read mappers such as BLASR, BWA-MEM, NGMLR and
GMAP. It is more accurate on simulated long reads and produces
biologically meaningful alignment ready for downstream analyses. For
>100bp Illumina short reads, minimap2 is three times as fast as
BWA-MEM and Bowtie2, and as accurate on simulated data.  Detailed
evaluations are available from the minimap2 paper or the preprint.

Release 2.18-r1015 (9 April 2021)
---------------------------------

This release fixes multiple rare bugs in minimap2 and adds additional
functionality to paftools.js.

Changes to minimap2:

* Bugfix: a rare segfault caused by an off-by-one error (#489)

* Bugfix: minimap2 segfaulted due to an uninitilized variable (#622 and #625).

* Bugfix: minimap2 parsed spaces as field separators in BED (#721). This led
  to issues when the BED name column contains spaces.

* Bugfix: minimap2 `--split-prefix` did not work with long reference names
  (#394).

* Bugfix: option `--junc-bonus` didn't work (#513)

* Bugfix: minimap2 didn't return 1 on I/O errors (#532)

* Bugfix: the `de:f` tag (sequence divergence) could be negative if there were
  ambiguous bases

* Bugfix: fixed two undefined behaviors caused by calling memcpy() on
  zero-length blocks (#443)

* Bugfix: there were duplicated SAM @SQ lines if option `--split-prefix` is in
  use (#400 and #527)

* Bugfix: option -K had to be smaller than 2 billion (#491). This was caused
  by a 32-bit integer overflow.

* Improvement: optionally compile against SIMDe (#597). Minimap2 should work
  with IBM POWER CPUs, though this has not been tested. To compile with SIMDe,
  please use `make -f Makefile.simde`.

* Improvement: more informative error message for I/O errors (#454) and for
  FASTQ parsing errors (#510)

* Improvement: abort given malformatted RG line (#541)

* Improvement: better formula to estimate the `dv:f` tag (approximate sequence
  divergence). See DOI:10.1101/2021.01.15.426881.

* New feature: added the `--mask-len` option to fine control the removal of
  redundant hits (#659). The default behavior is unchanged.

Changes to mappy:

* Bugfix: mappy caused segmentation fault if the reference index is not
  present (#413).

* Bugfix: fixed a memory leak via 238b6bb3

* Change: always require Cython to compile the mappy module (#723). Older
  mappy packages at PyPI bundled the C source code generated by Cython such
  that end users did not need to install Cython to compile mappy. However, as
  Python 3.9 is breaking backward compatibility, older mappy does not work
  with Python 3.9 anymore. We have to add this Cython dependency as a
  workaround.

Changes to paftools.js:

* Bugfix: the "part10-" line from asmgene was wrong (#581)

* Improvement: compatibility with GTF files from GenBank (#422)

* New feature: asmgene also checks missing multi-copy genes

* New feature: added the misjoin command to evaluate large-scale misjoins and
  megabase-long inversions.

Although given the many bug fixes and minor improvements, the core algorithm
stays the same. This version of minimap2 produces nearly identical alignments
to v2.17 except very rare corner cases.

Now unimap is recommended over minimap2 for aligning long contigs against a
reference genome. It often takes less wall-clock time and is much more
sensitive to long insertions and deletions.

(2.18: 9 April 2021, r1015)

(brook)

doc: Added biology/miniasm version 0.3

(brook)

Add biology/miniasm 0.3.

(brook)

biology/miniasm: add miniasm 0.3

Miniasm is a very fast OLC-based *de novo* assembler for noisy long
reads. It takes all-vs-all read self-mappings (typically by minimap)
as input and outputs an assembly graph in the GFA format. Different
from mainstream assemblers, miniasm does not have a consensus step. It
simply concatenates pieces of read sequences to generate the final
unitig sequences. Thus the per-base error rate is similar to the raw
input reads.

So far miniasm is in early development stage. It has only been tested
on a dozen of PacBio and Oxford Nanopore (ONT) bacterial data
sets. Including the mapping step, it takes about 3 minutes to assemble
a bacterial genome. Under the default setting, miniasm assembles 9 out
of 12 PacBio datasets and 3 out of 4 ONT datasets into a single
contig. The 12 PacBio data sets are [PacBio E.  coli
sample][PB-151103], [ERS473430][ERS473430], [ERS544009][ERS544009],
[ERS554120][ERS554120], [ERS605484][ERS605484],
[ERS617393][ERS617393], [ERS646601][ERS646601],
[ERS659581][ERS659581], [ERS670327][ERS670327],
[ERS685285][ERS685285], [ERS743109][ERS743109] and a deprecated PacBio
E.  coli data set. ONT data are acquired from the Loman Lab.

For a *C. elegans* PacBio data set (only 40X are used, not the whole
dataset), miniasm finishes the assembly, including reads overlapping,
in ~10 minutes with 16 CPUs. The total assembly size is 105Mb; the N50
is 1.94Mb. In comparison, the HGAP3 produces a 104Mb assembly with N50
1.61Mb. This dotter plot gives a global view of the miniasm assembly
(on the X axis) and the HGAP3 assembly (on Y). They are broadly
comparable. Of course, the HGAP3 consensus sequences are much more
accurate. In addition, on the whole data set (assembled in ~30 min),
the miniasm N50 is reduced to 1.79Mb. Miniasm still needs
improvements.

Miniasm confirms that at least for high-coverage bacterial genomes, it
is possible to generate long contigs from raw PacBio or ONT reads
without error correction. It also shows that minimap can be used as a
read overlapper, even though it is probably not as sensitive as the
more sophisticated overlapers such as MHAP and DALIGNER.  Coupled with
long-read error correctors and consensus tools, miniasm may also be
useful to produce high-quality assemblies.

## Algorithm Overview

1. Crude read selection. For each read, find the longest contiguous region
  covered by three good mappings. Get an approximate estimate of read
  coverage.

2. Fine read selection. Use the coverage information to find the good regions
  again but with more stringent thresholds. Discard contained reads.

3. Generate a string graph. Prune tips, drop weak overlaps and
  collapse short bubbles. These procedures are similar to those
  implemented in short-read assemblers.

4. Merge unambiguous overlaps to produce unitig sequences.

## Limitations

1. Consensus base quality is similar to input reads (may be fixed with a
  consensus tool).

2. Only tested on a dozen of high-coverage PacBio/ONT data sets (more testing
  needed).

3. Prone to collapse repeats or segmental duplications longer than input reads
  (hard to fix without error correction).

(brook)

doc/TODO: + magit-3.0.

(wiz)

x11/fltk13: remove superfluous libxcb and libXcursor dependencies

This reverts the recent changes again. I did not see that libXcursor
has been added in the meantime by someone else.

I also verfied that libxcb ends up in the work/.buildink as indirect dependency.

So both added entries in Makefile are gone again.

(thor)

seahorse: needs gdbus-codegen

(nia)

obs-studio: update PLISTs

(nia)

mariadb104-server: sync with mariadb105-server

(nia)

Note update of lang/rust to 1.51.0.

(he)

Update lang/rust to version 1.51.0.

Pkgsrc changes:
* Add support for the big-endian arm64 NetBSD target (aarch64_be).
* On NetBSD/i386, use the i586 (pentium) bootstrap kit variant in
  preference to i686.
* Adjust patches, re-compute line offsets, re-compute crate checksums.
* Remove a patch which was either integrated upstream and/or no longer
  applies.
* Bump bootstraps to 1.50.0.
* Move conditionals until after bsd.prefs.mk so that they work...
* Default to "dist" build target if cross-compiling, but allow
  also to override via rust.BUILD_TARGET.
* Allow overriding MAKE_JOBS_SAFE via rust.MAKE_JOBS_SAFE if you
  want a different trade-off between occasional breakage and performance.
* Adjust platform.mk according to work already done in wip/rust/
* Add a patch to optimize the install.sh script used to install binary
  bootstraps to not do so many forks; use case/esac and parameter expansion
  instead of grep, sed and cut.
* Drop building documentation for the binary bootstrap kits.  This will
  also impact the lang/rust-bin package.  For full documentation, build
  or install lang/rust as a package.

Upstream changes:

Version 1.51.0 (2021-03-25)
============================

Language
--------
- [You can now parameterize items such as functions, traits, and
  `struct`s by constant values in addition to by types and
  lifetimes.][79135] Also known as "const generics" E.g. you can
  now write the following. Note:  Only values of primitive integers,
  `bool`, or `char` types are currently permitted.
  ```rust
  struct GenericArray<T, const LENGTH: usize> {
      inner: [T; LENGTH]
  }

  impl<T, const LENGTH: usize> GenericArray<T, LENGTH> {
      const fn last(&self) -> Option<&T> {
          if LENGTH == 0 {
              None
          } else {
              Some(&self.inner[LENGTH - 1])
          }
      }
  }
  ```

Compiler
--------

- [Added the `-Csplit-debuginfo` codegen option for macOS platforms.][79570]
  This option controls whether debug information is split across
  multiple files or packed into a single file. **Note** This option
  is unstable on other platforms.
- [Added tier 3\* support for `aarch64_be-unknown-linux-gnu`,
  `aarch64-unknown-linux-gnu_ilp32`, and
  `aarch64_be-unknown-linux-gnu_ilp32` targets.][81455]

- [Added tier 3 support for `i386-unknown-linux-gnu` and
  `i486-unknown-linux-gnu` targets.][80662]

- [The `target-cpu=native` option will now detect individual features
  of CPUs.][80749]

\* Refer to Rust's [platform support page][platform-support-doc] for more
information on Rust's tiered platform support.

Libraries
---------

- [`Box::downcast` is now also implemented for any `dyn Any + Send
  + Sync` object.][80945]
- [`str` now implements `AsMut<str>`.][80279]
- [`u64` and `u128` now implement `From<char>`.][79502]
- [`Error` is now implemented for `&T` where `T` implements `Error`.][75180]
- [`Poll::{map_ok, map_err}` are now implemented for
  `Poll<Option<Result<T,E>>>`.][80968]
- [`unsigned_abs` is now implemented for all signed integer types.][80959]
- [`io::Empty` now implements `io::Seek`.][78044]
- [`rc::Weak<T>` and `sync::Weak<T>`'s methods such as `as_ptr`
  are now implemented for `T: ?Sized` types.][80764]
- [`Div` and `Rem` by their `NonZero` variant is now implemented
  for all unsigned integers.][79134]

Stabilized APIs
---------------

- [`Arc::decrement_strong_count`]
- [`Arc::increment_strong_count`]
- [`Once::call_once_force`]
- [`Peekable::next_if_eq`]
- [`Peekable::next_if`]
- [`Seek::stream_position`]
- [`array::IntoIter`]
- [`panic::panic_any`]
- [`ptr::addr_of!`]
- [`ptr::addr_of_mut!`]
- [`slice::fill_with`]
- [`slice::split_inclusive_mut`]
- [`slice::split_inclusive`]
- [`slice::strip_prefix`]
- [`slice::strip_suffix`]
- [`str::split_inclusive`]
- [`sync::OnceState`]
- [`task::Wake`]
- [`VecDeque::range`]
- [`VecDeque::range_mut`]

Cargo
-----
- [Added the `split-debuginfo` profile option to control the -Csplit-debuginfo
  codegen option.][cargo/9112]
- [Added the `resolver` field to `Cargo.toml` to enable the new
  feature resolver and CLI option behavior.][cargo/8997] Version
  2 of the feature resolver will try to avoid unifying features of
  dependencies where that unification could be unwanted.  Such as
  using the same dependency with a `std` feature in a build scripts
  and proc-macros, while using the `no-std` feature in the final
  binary. See the [Cargo book documentation][feature-resolver@2.0]
  for more information on the feature.

Rustdoc
-------

- [Rustdoc will now include documentation for methods available
  from _nested_ `Deref` traits.][80653]
- [You can now provide a `--default-theme` flag which sets the
  default theme to use for documentation.][79642]

Various improvements to intra-doc links:

- [You can link to non-path primitives such as `slice`.][80181]
- [You can link to associated items.][74489]
- [You can now include generic parameters when linking to items,
  like `Vec<T>`.][76934]

Misc
----
- [You can now pass `--include-ignored` to tests (e.g. with
  `cargo test -- --include-ignored`) to include testing tests marked
  `#[ignore]`.][80053]

Compatibility Notes
-------------------

- [WASI platforms no longer use the `wasm-bindgen` ABI, and instead
  use the wasm32 ABI.][79998]
- [`rustc` no longer promotes division, modulo and indexing operations
  to `const` that could fail.][80579]
- [The minimum version of glibc for the following platforms has
  been bumped to version 2.31 for the distributed artifacts.][81521]
    - `armv5te-unknown-linux-gnueabi`
    - `sparc64-unknown-linux-gnu`
    - `thumbv7neon-unknown-linux-gnueabihf`
    - `armv7-unknown-linux-gnueabi`
    - `x86_64-unknown-linux-gnux32`
- [`atomic::spin_loop_hint` has been deprecated.][80966] It's
  recommended to use `hint::spin_loop` instead.

Internal Only
-------------

- [Consistently avoid constructing optimized MIR when not doing codegen][80718]

[79135]: https://github.com/rust-lang/rust/pull/79135
[74489]: https://github.com/rust-lang/rust/pull/74489
[76934]: https://github.com/rust-lang/rust/pull/76934
[79570]: https://github.com/rust-lang/rust/pull/79570
[80181]: https://github.com/rust-lang/rust/pull/80181
[79642]: https://github.com/rust-lang/rust/pull/79642
[80945]: https://github.com/rust-lang/rust/pull/80945
[80279]: https://github.com/rust-lang/rust/pull/80279
[80053]: https://github.com/rust-lang/rust/pull/80053
[79502]: https://github.com/rust-lang/rust/pull/79502
[75180]: https://github.com/rust-lang/rust/pull/75180
[79135]: https://github.com/rust-lang/rust/pull/79135
[81521]: https://github.com/rust-lang/rust/pull/81521
[80968]: https://github.com/rust-lang/rust/pull/80968
[80959]: https://github.com/rust-lang/rust/pull/80959
[80718]: https://github.com/rust-lang/rust/pull/80718
[80653]: https://github.com/rust-lang/rust/pull/80653
[80579]: https://github.com/rust-lang/rust/pull/80579
[79998]: https://github.com/rust-lang/rust/pull/79998
[78044]: https://github.com/rust-lang/rust/pull/78044
[81455]: https://github.com/rust-lang/rust/pull/81455
[80764]: https://github.com/rust-lang/rust/pull/80764
[80749]: https://github.com/rust-lang/rust/pull/80749
[80662]: https://github.com/rust-lang/rust/pull/80662
[79134]: https://github.com/rust-lang/rust/pull/79134
[80966]: https://github.com/rust-lang/rust/pull/80966
[cargo/8997]: https://github.com/rust-lang/cargo/pull/8997
[cargo/9112]: https://github.com/rust-lang/cargo/pull/9112
[feature-resolver@2.0]: https://doc.rust-lang.org/nightly/cargo/reference/features.html#feature-resolver-version-2
[`Once::call_once_force`]: https://doc.rust-lang.org/stable/std/sync/struct.Once.html#method.call_once_force
[`sync::OnceState`]: https://doc.rust-lang.org/stable/std/sync/struct.OnceState.html
[`panic::panic_any`]: https://doc.rust-lang.org/stable/std/panic/fn.panic_any.html
[`slice::strip_prefix`]: https://doc.rust-lang.org/stable/std/primitive.slice.html#method.strip_prefix
[`slice::strip_suffix`]: https://doc.rust-lang.org/stable/std/primitive.slice.html#method.strip_prefix
[`Arc::increment_strong_count`]: https://doc.rust-lang.org/nightly/std/sync/struct.Arc.html#method.increment_strong_count
[`Arc::decrement_strong_count`]: https://doc.rust-lang.org/nightly/std/sync/struct.Arc.html#method.decrement_strong_count
[`slice::fill_with`]: https://doc.rust-lang.org/nightly/std/primitive.slice.html#method.fill_with
[`ptr::addr_of!`]: https://doc.rust-lang.org/nightly/std/ptr/macro.addr_of.html
[`ptr::addr_of_mut!`]: https://doc.rust-lang.org/nightly/std/ptr/macro.addr_of_mut.html
[`array::IntoIter`]: https://doc.rust-lang.org/nightly/std/array/struct.IntoIter.html
[`slice::split_inclusive`]: https://doc.rust-lang.org/nightly/std/primitive.slice.html#method.split_inclusive
[`slice::split_inclusive_mut`]: https://doc.rust-lang.org/nightly/std/primitive.slice.html#method.split_inclusive_mut
[`str::split_inclusive`]: https://doc.rust-lang.org/nightly/std/primitive.str.html#method.split_inclusive
[`task::Wake`]: https://doc.rust-lang.org/nightly/std/task/trait.Wake.html
[`Seek::stream_position`]: https://doc.rust-lang.org/nightly/std/io/trait.Seek.html#method.stream_position
[`Peekable::next_if`]: https://doc.rust-lang.org/nightly/std/iter/struct.Peekable.html#method.next_if
[`Peekable::next_if_eq`]: https://doc.rust-lang.org/nightly/std/iter/struct.Peekable.html#method.next_if_eq
[`VecDeque::range`]: https://doc.rust-lang.org/nightly/std/collections/struct.VecDeque.html#method.range
[`VecDeque::range_mut`]: https://doc.rust-lang.org/nightly/std/collections/struct.VecDeque.html#method.range_mut

(he)

doc: Updated www/curl to 7.77.0

(wiz)

TODO: add inkscape 1.1

(wiz)

curl: update to 7.77.0.

curl and libcurl 7.77.0

This release includes the following changes:

o configure: make the TLS library choice(s) explicit [3]
o curl: ignore options asking for SSLv2 or SSLv3 [10]
o hsts: enable by default [8]
o SSL: support in-memory CA certs for some backends [85]
o vtls: refuse setting any SSL version [9]

This release includes the following bugfixes:

o CVE-2021-22297: schannel cipher selection surprise [132]
o CVE-2021-22298: TELNET stack contents disclosure [131]
o CVE-2021-22901: TLS session caching disaster [130]
o AmigaOS: add functions definitions for SHA256 [126]
o build: fix compilation for Windows UWP platform [82]
o c-hyper: don't write to set.writeheader if null [67]
o c-hyper: fix handling of zero-byte chunk from hyper [39]
o c-hyper: handle body on HYPER_TASK_EMPTY [104]
o checksrc: complain on == NULL or != 0 checks in conditions [20]
o CI/cirrus: add shared and static Windows release builds [102]
o cmake: add CURL_ENABLE_EXPORT_TARGET option [133]
o cmake: check for getppid and utimes [87]
o cmake: detect CURL_SA_FAMILY_T [124]
o cmake: fix two invokes result in different curl_config.h [123]
o cmake: make libcurl output filename configurable [41]
o cmake: Use multithreaded compilation on VS 2008+ [122]
o config: remove now-unused macros [107]
o configure: if asked for, fail if ldap is not found [109]
o configure: provide --with-openssl, deprecate --with-ssl [15]
o conn: add 'attach' to protocol handler, make libssh2 use it [119]
o connect: use CURL_SA_FAMILY_T for portability [34]
o ConnectionExists: respect requests for h1 connections better
o cookie: CURLOPT_COOKIEFILE set to NULL switches off cookies [1]
o curl-wolfssl.m4: without custom include path, assume /usr/include [116]
o curl: include libmetalink version in --version output [111]
o Curl_http_header: check for colon when matching Persistent-Auth [51]
o Curl_http_input_auth: require valid separator after negotiation type [52]
o Curl_input_digest: require space after Digest [50]
o curl_mprintf.3: add description [73]
o curl_setup: provide the shutdown flags wider [33]
o curl_url_set.3: add memory management information [38]
o CURLcode: add CURLE_SSL_CLIENTCERT [47]
o CURLOPT_CAPATH.3: defaults to a path, not NULL [103]
o CURLOPT_IPRESOLVE: preventing wrong IP version from being used [125]
o CURLOPT_POSTFIELDS.3: clarify how it gets the size of the data [40]
o data_pending: check only SECONDARY socket for FTP(S) transfers [117]
o docs/TheArtOfHttpScripting: fix markdown links [129]
o docs: camelcase it like GitHub everywhere [62]
o docs: cookies from HTTP headers need domain set [121]
o docs: fix typo in fail-with-body doc [63]
o docs: improve INTERNALS.md regarding getsock cb [105]
o docs: replace dots with dashes in markdown enums [101]
o easy: ignore sigpipe in curl_easy_send [69]
o FILEFORMAT: mention sectransp as a feature [89]
o GIT-INFO: suggest using autoreconf instead of buildconf [96]
o github: add a workflow with libssh2 on macOS using cmake [81]
o github: inhibit deprecated declarations for clang on macOS [118]
o GnuTLS: don't allow TLS 1.3 for versions that don't support it [77]
o gnutls: make setting only the MAX TLS allowed version work [83]
o gskit: fix CURL_DISABLE_PROXY build [57]
o gskit: fix undefined reference to 'conn' [58]
o hostip.h: remove declaration of unimplemented function [108]
o hostip: remove the debug code for LocalHost [113]
o http2: call the handle-closed function correctly on closed stream [37]
o http2: fix a resource leak in push_promise() [54]
o http2: fix resource leaks in set_transfer_url() [55]
o http2: make sure pause is done on HTTP [120]
o http2: move the stream error field to the per-transfer storage [36]
o http2: skip immediate parsing of payload following protocol switch [90]
o http2: use nghttp2_session_upgrade2 instead of nghttp2_session_upgrade [91]
o HTTP3.md: fix nghttp2's HTTP/3 server port [21]
o HTTP3.md: make the ngtcp2 build use the quictls fork [98]
o http: deal with partial CONNECT sends [97]
o http: fix the check for 'Authorization' with Bearer [53]
o http: limit the initial send amount to used upload buffer size [99]
o http: reset the header buffer when sending the request [61]
o http: use offsets inst of integer literals for header parsing [95]
o INSTALL: add IBM i specific quirks [75]
o krb5/name_to_level: replace checkprefix with curl_strequal [49]
o krb5: don't use 'static' to store PBSZ size response [23]
o krb5: remove the unused 'overhead' function [35]
o lib/hostip6.c: make NAT64 address synthesis on macOS work [135]
o lib1564.c: enable last wakeup test part on Windows [26]
o lib: fix 0-length Curl_client_write calls [60]
o lib: fix some misuse of curlx_convert_UTF8_to_tchar [64]
o libcurl-security.3: be careful of setuid [66]
o libcurl-security.3: don't try to filter IPv4 hosts based on the URL [71]
o libcurl.3: mention the URL API [76]
o libssh2: fix Value stored to 'sshp' is never read [13]
o libssh2: ignore timeout during disconnect [45]
o libssh: fix "empty expression statement has no effect" warnings [7]
o libtest: remove lib530.c [88]
o m4: add security frameworks on Mac when compiling rustls [31]
o multi: don't close connection HTTP_1_1_REQUIRED
o multi: fix slow write/upload performance on Windows [27]
o multi: reduce Win32 API calls to improve performance [28]
o ngtcp2: fix the cb_acked_stream_data_offset proto [46]
o NSS: add ciphers to map [30]
o NSS: make colons, commas and spaces valid separators in cipher list [106]
o nss_set_blocking: avoid static for sock_opt [72]
o ntlm: precaution against super huge type2 offsets [65]
o openldap: protect SSL-specific code with proper #ifdef [12]
o openldap: replace ldap_ prefix on private functions [84]
o openssl: fix build error with OpenSSL < 1.0.2 [4]
o openssl: remove unneeded cast for CertOpenSystemStore() [93]
o os400: additional support for options metadata [24]
o progress: fix scan-build-11 warnings [92]
o progress: reset limit_size variables at transfer start [114]
o progress: when possible, calculate transfer speeds with microseconds [48]
o README.md: delete Codacy UTM parameters [5]
o Revert "Revert 'multi: implement wait using winsock events'" [26]
o rustls: only return CURLE_AGAIN when TLS session is fully drained [2]
o rustls: use ALPN [56]
o sasl: use 'unsigned short' to store mechanism [112]
o schannel: Disable auto credentials; add an option to enable it [18]
o schannel: Support strong crypto option [44]
o sectransp: allow cipher name to be specified [29]
o sectransp: fix EXC_BAD_ACCESS caused by uninitialized buffer [136]
o sigpipe: ignore SIGPIPE when using wolfSSL as well [70]
o sockfilt: avoid getting stuck waiting for writable socket [80]
o sockfilt: fix invalid increment of handles index variable nfd [79]
o sws: #ifdef S_IFSOCK use [32]
o sws: allow HTTP requests up to 2MB in size [100]
o test server: take care of siginterrupt() deprecation [25]
o test2100: make it run with and require IPv6 [127]
o tests/disable-scan.pl: also scan all m4 files [17]
o tests/getpart: generate output URL encoded for better diffs [128]
o tests: ignore case of chunked hex numbers in tests [86]
o tls: add USE_HTTP2 define [59]
o tool_getparam: handle failure of curlx_convert_tchar_to_UTF8() [78]
o tool_getparam: replace (in-place) '%20' by '+' according to RFC1866 [14]
o tool_operate: don't discard failed parallel transfer result [16]
o tool_writeout: fix the HTTP_CODE json output [11]
o travis: disable the failing libssh build [94]
o URL-SYNTAX: update IDNA section for WHATWG spec changes [74]
o urlapi: "normalize" numerical IPv4 host names [6]
o vauth: factor base64 conversions out of authentication procedures [22]
o version: add gsasl_version to curl_version_info_data [43]
o version: add OpenLDAP version in the output [110]
o vtls: deduplicate some DISABLE_PROXY ifdefs [19]
o vtls: reset ssl use flag upon negotiation failure [42]
o wolfssl: handle SSL_write() returns 0 for error [68]
o wolfssl: remove SSLv3 support leftovers [115]

(wiz)

doc: Updated audio/fasttracker2 to 1.47

(fox)

audio/fasttracker2: Updates to v1.47

Changes since v1.46

v1.47 - xx.05.2021
- Bugfix: The Lxx (Set Envelope Pos) XM effect was broken :(
- Added support for loading FLAC samples (w/ loop/vol./name information)
- Added support for loading '8-bit unsigned/32-bit float/64-bit double' AIFFs
- Added support for loading XMs with ADPCM sample compression (ModPlug Tracker)
- The windowed-sinc LUT now has 8192 phases instead of 4096 for a theoretical
  small interpolation precision improvement.
- Bugfix: Fixed a bug with "Save rng." (Smp. Ed.) related to data after/around
  the loop end point.
- "Save rng." (Smp. Ed.) now asks if you want to overwrite an existing file
- Bugfix: The windowed-sinc interpolation was slightly wrong near the loop-start
  point on looped samples. Was only audible on super-tight loops.
- Mixer now uses 32-bit single-precision floats instead of 64-bit
  double-precision. The error difference in the audio output is +/- 1 (16-bit),
  which is only -90dbFS and not really audible. This should give a performance
  boost for devices that are slow with handling double-precision floats.
- Samples now have units of "samples" instead of bytes (in the sample editor).
  This means that 16-bit samples will show the same numbers as 8-bit samples.
- The sample editor is now drawing interpolated sample points when zoomed in
- Fixed a bug where the "Range" button in Smp. Ed. had problems if you had
  marked sample data after 65535 sample points.
- Fixed a problem where the mouse pointer could be broken in fullscreen mode
  at some screen resolutions (f.ex. 1600x900).
- Windows bugfix: Prevent ever-increasing memory usage while minimized.
  Possibly a bug in SDL_RenderClear(). Might've affected other systems too.
- Bugfix: Exit text edit mode when dropping a file onto the window. Fixes
  possible text cursor overflow issues.
- Bugfix: Some instrument/sample names could contain junk at the end after being
  saved (.XM/.XI).
- Bugfix: If you previously used an audio device that was disconnected before
  starting the program, it will now resort to the default audio device without
  reverting all your audio settings (buffer size, bit depth, frequency).
- Fixed possible crash if a channel's resampling rate/delta was zero (very rare)
- If you copy all the sample data in a sample, it will also copy over the sample
  information (loop, volume, finetune, name etc.) when you paste it to a new
  sample.
- The "Get maximum scale" button in the "Volume" tool in Smp. Ed. will now
  get the actual scale instead of limiting it to the start/end vol max range.
  This means that you need only one pass to normalize the amplitude on a very
  quiet sample.
- The scopes now use linear interpolation for sample points in "Lined" mode
- Fixed a mistake in the S3M importer where "Set speed" commands with a
  parameter of >$1F were removed instead of being clamped.
- Clearing the instrument (numpad delete key) also clears instrument name now
- Added new keybinding: Press Ctrl + "numpad+"/"numpad-" to increase or decrease
  the master volume by 16.
- Updated the help text
- A *lot* of variable/function names have been changed to be easier to understand.
  This causes a mega-commit to the GitHub repo, and I'm sorry for that if you
  have a fork of it that you want to keep updated. :/
- Code cleanup (big one)

(fox)

qemu: add PLIST entry for hexagon linux-user target

This linux-user target was introduced in qemu 6.0, but it was missing
in UE_ARCHS and PLIST.

(mcf)

doc: Updated pkgtools/pkglint to 21.1.2

(rillig)

pkglint: update to 21.1.2

Changes since 21.1.1:

Fixed the check for BUILDLINK3_PKGSRCDIR.  Previously, pkglint had
complained about ${_EMACS_PKGDIR} in buildlink3.mk.

(rillig)

audio/mpg123: fix sed expression for non-GNU

(thor)

audio/mpg123: really fix PLIST.oss check

(thor)

url2pkg: fix dependency pattern for buildlink3 Python dependencies

This includes the PYPKGPREFIX for Python dependencies, whether or not
they use buildlink3.

(rillig)

url2pkg: generate proper package name for Python dependencies

Reported by Brook Milligan via private mail.

(rillig)

add missing files

(nia)

s-nail: use PKGMANDIR

(nia)

url2pkg: break long lines, no functional change

(rillig)

chat/gomuks: Add -O2 to CGO_CFLAGS

This fixes

  /usr/include/features.h:397:4: error: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Werror=cpp]

on Linux.

(js)

audio/mpg123: fix check for PLIST.oss

(thor)

doc: Updated finance/rates to 0.4.0

(pin)

finance/rates: update to 0.4.0

-Hot fix for broken API

(pin)

doc: Updated wm/herbstluftwm to 0.9.3

(pin)

wm/herbstluftwm: update to 0.9.3

-Fix transparency of 32 bit client's border (#1178)
-Prepare Colors for alpha values (#1180)
-Make default colors more transparent and quiet (#1185)
-Support true transparency in all decorations (#1186)
-Cut holes into frames behind tiled clients (#1187)
-'shift' moves between monitors if appropriate (#1198)
-Option --replace to replace existing window manager (#1209)
-Manage desktop windows in global stack (#1210)
-Start --locked from the .desktop file (#1222)
-Fix doc/gendoc.py extractor to strip comments (#1229)
-Use posix escaping in Completion objects (#1226)
-Remember last reported geometry in client directly (#1240)
-Always reply to a ConfigureRequest with ConfigureNotify (#1244)
-Move 'focus_edge' and 'shift_edge' to GlobalCommands (#1252)
-Allow relative values for int and uint attributes (#1253)
-Parse --skip-visible in move_index command (#1257)
_Make 'cycle' work for the floating layer (#1258)
-tox: Switch default Python env to 38 (#1269)
-New command 'list_clients' (#1274)
-Add client attribute 'floating_geometry' (#1272)
-Support error output channel internally (#1278)
-Auto-convert attributes to/from python types (#1277)
-Remove alpha-value from colors in panel.sh (#1283)
-Extend IPC protocol by error channel (#1285)
-client: Remove unused methods (#1291)
-Test herbstclient -0 --idle (#1294)
-Fix exec error message in spawn command (#1304)
-Wait passively for hc in test suite ipc server (#1306)
-Handle text properties more robustly (#1303)
-Test shift/resize up/left and focus cycling (#1308)
-Add 'floating_geometry' rule consequence (#1311)
-Client alias 'longest-minimized' and 'last-minimized' (#1313)

(pin)

doc: Updated x11/alacritty to 0.8.0

(pin)

x11/alacritty: update to 0.8.0

Packaging:
-Minimum Rust version has been bumped to 1.45.0

Added:
-IME composition preview not appearing on Windows
-Synchronized terminal updates using DCS = 1 s ST/DCS = 2 s ST
-Regex terminal hints (see features.md)
-macOS keybinding (cmd+alt+H) hiding all windows other than Alacritty
-Support for magnet URLs

Changed:
-The vi mode cursor is now created in the top-left if the terminal cursor is
invisible
-Focused search match will use cell instead of match colors for
CellForeground/CellBackground
-URL highlighting has moved from mouse.url to the hints config section

Fixed:
-Alacritty failing to start on X11 with invalid DPI reported by XRandr
-Text selected after search without any match
-Incorrect vi cursor position after leaving search
-Clicking on URLs on Windows incorrectly opens File Explorer
-Incorrect underline cursor thickness on wide cell
-Viewport moving around when resizing while scrolled into history
-Block cursor not expanding across fullwidth characters when on the right
side of it
-Overwriting fullwidth characters only clearing one of the involved cells

(pin)

doc: Updated textproc/paperoni to 0.4.1

(pin)

textproc/paperoni: update to 0.4.1

-This patch release fixes the issue in #11 and #13.
-Missing images are not handled #11
-img src gets mangled on some images #13

(pin)

doc: Updated sysutils/xplr to 0.12.1

(pin)

sysutils/xplr: update to 0.12.1

0.12.1
======
-Fixed compilation with stable rust.

0.12.0
======
Changes & fixes:
-xplr.config.node_types.mime_essence has split into type and subtype. Hence,
instead of xplr.config.node_types.mime_essence["text/plain"] = .. use
xplr.config.node_types.mime_essence["text"] = { plain = .. }.
-You can also define xplr.config.node_types.mime_essence["text"]["*"] that will
match all text types (text/*).
-Functions called using CallLua and CallLuaSilently now have optional return
type.
-Some minor improvements to permission rendering.

0.11.1
======
-Fixed ctrl-i key behavior by remapping it back to tab.

0.11.0
======
Changes & fixes:
-Added file permissions.
-Added support for setting terminal colors from Lua functions.
-Removed remaps: from key bindings. Remapped keys using Lua assignments instead.
-Current mode will also be displayed on the input & logs panel title.
-Mapped :q to "quit" action.
-Minor UI fixes.

(pin)

typo.

(nia)

doc: Added mail/s-nail version 14.9.22

(nia)

import mail/s-nail. via jgw@sdf.org, PR pkg/56111

S-nail (later S-mailx) provides a simple and friendly environment for
sending and receiving mail.  It is intended to provide the functionality
of the POSIX mailx(1) command, but is MIME capable and optionally offers
extensions for line editing, S/MIME, SMTP and POP3, among others.
It divides incoming mail into its constituent messages and allows the
user to deal with them in any order, offers many commands and variables
for manipulating messages and sending mail, as well as line editing, and
increasingly powerful scripting capabilities.

(nia)

Pullup tickets up to #6461

(bsiegert)

Pullup ticket #6461 - requested by nia
print/mupdf: security fix

Revisions pulled up:
- print/mupdf/Makefile                                          1.87
- print/mupdf/distinfo                                          1.53
- print/mupdf/patches/patch-source_pdf_pdf-parse.c              1.1
- print/mupdf/patches/patch-source_pdf_pdf-xref.c              1.3

---
  Module Name: pkgsrc
  Committed By: nia
  Date: Tue May 25 07:59:43 UTC 2021

  Modified Files:
  pkgsrc/print/mupdf: Makefile distinfo
  Added Files:
  pkgsrc/print/mupdf/patches: patch-source_pdf_pdf-parse.c
      patch-source_pdf_pdf-xref.c

  Log Message:
  mupdf: apply fix for CVE-2021-3407, bump PKGREVISION

(bsiegert)

Pullup ticket #6460 - requested by nia
graphics/cairo: security fix

Revisions pulled up:
- graphics/cairo/Makefile                                      1.149
- graphics/cairo/distinfo                                      1.90
- graphics/cairo/patches/patch-src_cairo-image-compositor.c    1.1

---
  Module Name: pkgsrc
  Committed By: nia
  Date: Tue May 25 07:29:42 UTC 2021

  Modified Files:
  pkgsrc/graphics/cairo: Makefile distinfo
  Added Files:
  pkgsrc/graphics/cairo/patches: patch-src_cairo-image-compositor.c

  Log Message:
  cairo: apply patch for CVE-2020-35492, bump PKGREVISION

(bsiegert)

Pullup ticket #6459 - requested by nia
textproc/libxslt: build fix

Revisions pulled up:
- textproc/libxslt/distinfo                                    1.66
- textproc/libxslt/patches/patch-configure                      1.3

---
  Module Name: pkgsrc
  Committed By: mcf
  Date: Mon May 24 04:18:19 UTC 2021

  Modified Files:
  pkgsrc/textproc/libxslt: distinfo
  Added Files:
  pkgsrc/textproc/libxslt/patches: patch-configure

  Log Message:
  libxslt: fix libxml2 detection with libxml2 >= 2.9.11

  xml2-config from libxml2 >= 2.9.11 now exits with non-zero status
  for invalid arguments. libxslt called xml2-config with the invalid
  `print` option to probe for its existence, so with new libxml2 it
  now skipped detection via xml2-config entirely causing a build
  failure.

  Apply upstream patch to correct this invalid xml2-config usage.

(bsiegert)

Pullup ticket #6458 - requested by nia
textproc/libxml2: security fix

Revisions pulled up:
- textproc/libxml2/Makefile                                    1.159
- textproc/libxml2/Makefile.common                              1.14
- textproc/libxml2/distinfo                                    1.135
- textproc/libxml2/patches/patch-parser.c                      deleted
- textproc/libxml2/patches/patch-python-types.c                deleted
- textproc/libxml2/patches/patch-python_libxml.c                deleted
- textproc/libxml2/patches/patch-xmlschemas.c                  deleted
- textproc/py-libxml2/Makefile                                  1.68

---
  Module Name: pkgsrc
  Committed By: nia
  Date: Sun May 23 19:31:47 UTC 2021

  Modified Files:
  pkgsrc/textproc/libxml2: Makefile Makefile.common distinfo
  pkgsrc/textproc/py-libxml2: Makefile
  Removed Files:
  pkgsrc/textproc/libxml2/patches: patch-parser.c patch-python-types.c
      patch-python_libxml.c patch-xmlschemas.c

  Log Message:
  libxml2: update to 2.9.12

  2.9.12:
  "Brown paper bag release, some recently added sources were missing from
  the 2.9.11 tarball."

  2.9.11:
  "Prompted by CVE-2021-3541, but this includes an awful lot of serious bug
  fixes by Nick and others."

(bsiegert)

mariadb105-server: add more PKG_OPTIONS.

The defaults are basically based on what FreeBSD/OpenBSD are doing.

MariaDB includes several third-party storage engines (e.g. RocksDB)
which are developed out-of-tree and don't generally have the same
(e.g. portability) guarantees. Keep these disabled by default for now.

bump PKGREVISION.

(nia)

doc: removed mpg123-oss, mpg123-sun

(nia)

remove: mpg123-oss, mpg123-sun

- mpg123-sun is, quite literally, impossible to install.
  It's always built-in to mpg123 where it's available.
- mpg123-oss is built-in to mpg123 on operating systems where it's useful.

ok'd by thor.

(nia)

+columnstore

(nia)

doc: Updated mail/fetchmail to 6.4.19

(triaxx)

fetchmail: Update to 6.4.19

upstream changes:
-----------------
fetchmail-6.4.19 (released 2021-04-24, 30026 LoC):

# CHANGE:
* fetchmailconf: properly catch and report option parsing errors

# BUG FIX:
* LMTP: do not try to validate the last component of a UNIX-domain LMTP socket
  as though it were a TCP port.  Reported by Christoph Heitkamp, Gitlab issue #33.

# TRANSLATION UPDATE:
  This fine person has contributed an updated translation:
* sr:    Мирослав Николић (Miroslav Nikolić) [Serbian]

--------------------------------------------------------------------------------
fetchmail-6.4.18 (released 2021-03-27, 30011 LoC):

# REGRESSION FIX:
* fetchmailconf: fetchmail 6.4.16 added --sslcertfile to the configuration dump,
  but fetchmailconf support was incomplete in Git 7349f124 and it could not
  parse sslcertfile, thus the user settings editor came up empty with console
  errors printed.  Fix configuration parser in fetchmailconf.

# ROBUSTNESS FIXES:
* fetchmailconf: do not require fetchmail for -V. do not require Tk (Tkinter)
  for -d option. This is to fail more gracefully on incomplete installs.
* TLS code: remove OPENSSL_NO_DEPRECATED macros to avoid portability issues
  with OpenSSL v3 - these are for development purposes, not production.
* TLS futureproofing: use SSL_use_PrivateKey_file instead of
  SSL_use_RSAPrivateKey_file, the latter will be deprecated with OpenSSL v3,
  and the user's key file might be something else than RSA.

# TRANSLATION UPDATE:
  This fine person has contributed an updated translation:
* fi:    Lauri Nurmi [Finnish]

--------------------------------------------------------------------------------
fetchmail-6.4.17 (released 2021-03-07, 29998 LoC):

# BUG FIXES
* IMAP client: it used to leak memory for username and password when trying
  the LOGIN (password-based) authentication and encountered a timeout situation.
* dist-tools/getstats.py: also counts lines in *.py files, shown above.

# CHANGES
* fetchmail.man: now mentions that you may need to add --ssl when specifying
  a TLS-wrapped port.
* fetchmailconf: --version (-V) now prints the Python version in use.

# TRANSLATION UPDATE:
  This fine person has contributed an updated translation:
* ja:    Takeshi Hamasaki [Japanese]

--------------------------------------------------------------------------------
fetchmail-6.4.16 (released 2021-02-08, 27707 LoC):

# BUG FIXES
* fetchmail's --configdump, and fetchmailconf, lacked support for the
  sslcertfile option. --configdump support added by Earl Chew,
  Gitlab issue #25, merge request !28.
* fetchmail's manual page was never updated to reflect 6.2.5's change about the
  duplicate-killer code for multidrop mode, which read
  "* Dup-killer code now keys on an MD5 hash of the raw headers."
  ...instead of just the Message-ID. [commit 9dd8400, 2003-10-10 by esr]
  The manual page was now updated accordingly and documents
  historic behaviour:
  start to 5.0.7 no duplicate suppression;
  5.0.8 to 6.2.4 duplicate suppression only by Message-ID;
  6.2.5 to 6.4.X duplicate suppression by entire raw header.
  Manpage bug found by Julian Bane debugging "duplicate message" behaviour.
* ./configure no longer runs AC_LIB_LINKFLAGS (how to link) checks
  when called --without-ssl

# FEATURES
* fetchmail --version [fetchmail -V] now queries and prints the SSL/TLS
  library's "SSL default trusted certificate" file or directory (mind the word
  "default"), where the OpenSSL-compatible TLS implementation will look for
  trusted root, meaning certification authority (CA), certificates.
  NOTE 1: watch the output carefully if the line prints the defaults
  or the configured path (without "default").
  NOTE 2: SSL_CERT_DIR and SSL_CERT_FILE are documented environment variables
  for OpenSSL 1.1.1 to override the *default* locations (those compiled into
  OpenSSL or possibly in its configuration file).
  This was added when Gene Heskett was debugging his setup and the
  information "where does OpenSSL look" was missing.
* fetchmail --version now prints version of the OpenSSL library that
  it was compiled against, and that it is using at runtime, and also
  the OPENSSL_DIR and OPENSSL_ENGINES_DIR (if available).

# TRANSLATION UPDATES
  These fine people have contributed updated translations for fetchmail,
  in no particular order:
* sq:    Besnik Bleta [Albanian]
* eo:    Keith Bowes [Esperanto]
* cs:    Petr Pisar [Czech]
* pl:    Jakub Bogusz [Polish]
* sv:    Göran Uddeborg [Swedish]
* fr:    Frédéric Marchal [French]

(triaxx)