Sun Dec 11 21:25:48 2022 UTC ()
biology/fastq-trim: Update to 0.1.2

Minor enhancements, fixes for SunOS

Changes:    https://github.com/auerlab/fastq-trim/releases


(bacon)
diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/Makefile
diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/PLIST
diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/distinfo
cvs diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/Makefile (expand / switch to unified diff)

--- pkgsrc/biology/fastq-trim/Makefile 2022/11/06 22:49:37 1.1
+++ pkgsrc/biology/fastq-trim/Makefile 2022/12/11 21:25:47 1.2
@@ -1,19 +1,18 @@ @@ -1,19 +1,18 @@
1# $NetBSD: Makefile,v 1.1 2022/11/06 22:49:37 bacon Exp $ 1# $NetBSD: Makefile,v 1.2 2022/12/11 21:25:47 bacon Exp $
2 2
3DISTNAME= fastq-trim-0.1.1.16 3DISTNAME= fastq-trim-0.1.2
4CATEGORIES= biology 4CATEGORIES= biology
5MASTER_SITES= ${MASTER_SITE_GITHUB:=outpaddling/} 5MASTER_SITES= ${MASTER_SITE_GITHUB:=outpaddling/}
6GITHUB_TAG= 58a016f250a9b785bfed574ce471ec7e23cdaa4a 
7 6
8MAINTAINER= bacon@NetBSD.org 7MAINTAINER= bacon@NetBSD.org
9HOMEPAGE= https://github.com/outpaddling/Fastq-trim 8HOMEPAGE= https://github.com/outpaddling/Fastq-trim
10COMMENT= Lightening fast sequence read trimmer 9COMMENT= Lightening fast sequence read trimmer
11LICENSE= 2-clause-bsd 10LICENSE= 2-clause-bsd
12 11
13MAKE_ENV= VERSION=${PKGVERSION} 12MAKE_ENV= VERSION=${PKGVERSION}
14 13
15LDFLAGS.SunOS= -lresolv 14LDFLAGS.SunOS= -lresolv
16 15
17pre-build: 16pre-build:
18 (cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend) 17 (cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend)
19 18
cvs diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/PLIST (expand / switch to unified diff)

--- pkgsrc/biology/fastq-trim/PLIST 2022/11/06 22:49:37 1.1
+++ pkgsrc/biology/fastq-trim/PLIST 2022/12/11 21:25:47 1.2
@@ -1,14 +1,14 @@ @@ -1,14 +1,14 @@
1@comment $NetBSD: PLIST,v 1.1 2022/11/06 22:49:37 bacon Exp $ 1@comment $NetBSD: PLIST,v 1.2 2022/12/11 21:25:47 bacon Exp $
2bin/fastq-scum 2bin/fastq-scum
3bin/fastq-trim 3bin/fastq-trim
4include/fastq-trim-accessors.h 4include/fastq-trim-accessors.h
5include/fastq-trim-mutators.h 5include/fastq-trim-mutators.h
6include/fastq-trim-rvs.h 6include/fastq-trim-rvs.h
7include/fastq-trim.h 7include/fastq-trim.h
8lib/libfastq-trim.a 8lib/libfastq-trim.a
9man/man1/fastq-scum.1 9man/man1/fastq-scum.1
10man/man1/fastq-trim.1 10man/man1/fastq-trim.1
11man/man3/FASTQ_TRIM_ADAPTER1.3 11man/man3/FASTQ_TRIM_ADAPTER1.3
12man/man3/FASTQ_TRIM_ADAPTER1_AE.3 12man/man3/FASTQ_TRIM_ADAPTER1_AE.3
13man/man3/FASTQ_TRIM_ADAPTER2.3 13man/man3/FASTQ_TRIM_ADAPTER2.3
14man/man3/FASTQ_TRIM_ADAPTER2_AE.3 14man/man3/FASTQ_TRIM_ADAPTER2_AE.3
cvs diff -r1.1 -r1.2 pkgsrc/biology/fastq-trim/distinfo (expand / switch to unified diff)

--- pkgsrc/biology/fastq-trim/distinfo 2022/11/06 22:49:37 1.1
+++ pkgsrc/biology/fastq-trim/distinfo 2022/12/11 21:25:47 1.2
@@ -1,5 +1,5 @@ @@ -1,5 +1,5 @@
1$NetBSD: distinfo,v 1.1 2022/11/06 22:49:37 bacon Exp $ 1$NetBSD: distinfo,v 1.2 2022/12/11 21:25:47 bacon Exp $
2 2
3BLAKE2s (fastq-trim-0.1.1.16-58a016f250a9b785bfed574ce471ec7e23cdaa4a.tar.gz) = a2383eed63d5bb75dbb8c1ca2f6a5f08f737cb6243772e87d0477938cc3440f7 3BLAKE2s (fastq-trim-0.1.2.tar.gz) = d86b5a4a59c9b3e82b4a303c272e9818a9b54532e64d7e42e4c89dea34591fc4
4SHA512 (fastq-trim-0.1.1.16-58a016f250a9b785bfed574ce471ec7e23cdaa4a.tar.gz) = 26d0bf350bac6b3bbfb98d35e6587a1b58a9f353f376f676d97a9c6ff36e41ea05a906eeee2089834f05e26121b7014fd93ef5ba732eb8f8d977edfacaa01225 4SHA512 (fastq-trim-0.1.2.tar.gz) = e27852410cc0af06e30d06e1266be6639ff2f63cd35c61801817b37241a6feb41ef5efc5e8668333a19d575a7c018a85113b3e6ec618e2fcbdb2572c05be6148
5Size (fastq-trim-0.1.1.16-58a016f250a9b785bfed574ce471ec7e23cdaa4a.tar.gz) = 29819 bytes 5Size (fastq-trim-0.1.2.tar.gz) = 29796 bytes